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Q2G7N8

- Q2G7N8_NOVAD

UniProt

Q2G7N8 - Q2G7N8_NOVAD

Protein
Submitted name:

ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module

Gene

Saro_1695

Organism
Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 57 (01 Oct 2014)
      Sequence version 1 (21 Mar 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciNARO279238:GHBU-1720-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase moduleImported
    Gene namesi
    Ordered Locus Names:Saro_1695Imported
    OrganismiNovosphingobium aromaticivorans (strain DSM 12444 / F199)Imported
    Taxonomic identifieri279238 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
    ProteomesiUP000009134: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi279238.Saro_1695.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2G7N8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiDWTIRSI.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2G7N8-1 [UniParc]FASTAAdd to Basket

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    MGRNDPLAAY NAKRDFARTA EPAGKRKSSA TGNLFIVQKH DATRLHWDFR    50
    MEVDGVLKSW AVTRGPSPDP DDKRLAVQTE DHPLEYARFE GIIPEGEYGG 100
    GTVMLWDKGT WEPVEGKSAK DLEKGHLHFR LEGERMKGEW LLVRLKRRGN 150
    EKRDNWLLRK LDDAYAGQGD QLVERGLTSV LTGRTMAEIA SDKAGSHSLK 200
    GKRGKAFASV MEEAGTHNRK VGKARGKAPS RARRNAPLPA FQPVQLATLV 250
    DTVPDGRQWL YEIKFDGYRA LVAVRGTEVR VFTRSGLDWT EKFAPLARHL 300
    AGLKLPSCLI DGEIVAADAD GNPDFSRLQA VLKRGHGEQG EGDALSFHAF 350
    DLLELEGEDL KPLPNVERKQ KLAALLAGVS PPIHVADHII GGGEKLLGAL 400
    CGAGQEGIIC KRADAAYAGK RTQNWLKVKC VARQEFIVVG FTRSSARRRP 450
    FASLLLAQRE GKALVYKGKV GTGFDEDLLQ DLATRFEALK VDEGPLDVPI 500
    TEARGVTWLK PELVAEIAFA EFTAEGRVRH ASFVGLREDK KAADVVPERP 550
    APLVVQPEIV PISNRERVIF PESGQTKGDL ADYYAAMAPA MLPFIANRPV 600
    SLVRCPQGRA RHCFFQKHDS GSFGEHVHHV PIREKDGNEE EYLFVSDAAG 650
    ILSCVQMGTI EFHGWCSLAS DVEAPERMVI DLDPDEGLDF NDVKRAARDI 700
    RDRLSDLGLV SFAMLSGGKG VHVVVPLRPD HTWEAHASFA ERFARALALA 750
    EPDRYVATMS KARRKGRIFI DWLRNRRGST AVMPYSARAR ANAPVAVPIA 800
    WEELDDFANA HPFCIGDTAG LLKRSEGKSL RGWGMAQQSL PDV 843
    Length:843
    Mass (Da):93,005
    Last modified:March 21, 2006 - v1
    Checksum:iCAED803A93AA2AD5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000248 Genomic DNA. Translation: ABD26135.1.
    RefSeqiYP_496969.1. NC_007794.1.

    Genome annotation databases

    EnsemblBacteriaiABD26135; ABD26135; Saro_1695.
    GeneIDi3916270.
    KEGGinar:Saro_1695.
    PATRICi22786070. VBINovAro50627_1730.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000248 Genomic DNA. Translation: ABD26135.1 .
    RefSeqi YP_496969.1. NC_007794.1.

    3D structure databases

    ProteinModelPortali Q2G7N8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 279238.Saro_1695.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD26135 ; ABD26135 ; Saro_1695 .
    GeneIDi 3916270.
    KEGGi nar:Saro_1695.
    PATRICi 22786070. VBINovAro50627_1730.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi DWTIRSI.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci NARO279238:GHBU-1720-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 12444 / F199Imported.

    Entry informationi

    Entry nameiQ2G7N8_NOVAD
    AccessioniPrimary (citable) accession number: Q2G7N8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 21, 2006
    Last sequence update: March 21, 2006
    Last modified: October 1, 2014
    This is version 57 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3