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Q2G7N8 (Q2G7N8_NOVAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Saro_1695 EMBL ABD26135.1
OrganismNovosphingobium aromaticivorans (strain DSM 12444 / F199) [Complete proteome] [HAMAP] EMBL ABD26135.1
Taxonomic identifier279238 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium

Protein attributes

Sequence length843 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q2G7N8 [UniParc].

Last modified March 21, 2006. Version 1.
Checksum: CAED803A93AA2AD5

FASTA84393,005
        10         20         30         40         50         60 
MGRNDPLAAY NAKRDFARTA EPAGKRKSSA TGNLFIVQKH DATRLHWDFR MEVDGVLKSW 

        70         80         90        100        110        120 
AVTRGPSPDP DDKRLAVQTE DHPLEYARFE GIIPEGEYGG GTVMLWDKGT WEPVEGKSAK 

       130        140        150        160        170        180 
DLEKGHLHFR LEGERMKGEW LLVRLKRRGN EKRDNWLLRK LDDAYAGQGD QLVERGLTSV 

       190        200        210        220        230        240 
LTGRTMAEIA SDKAGSHSLK GKRGKAFASV MEEAGTHNRK VGKARGKAPS RARRNAPLPA 

       250        260        270        280        290        300 
FQPVQLATLV DTVPDGRQWL YEIKFDGYRA LVAVRGTEVR VFTRSGLDWT EKFAPLARHL 

       310        320        330        340        350        360 
AGLKLPSCLI DGEIVAADAD GNPDFSRLQA VLKRGHGEQG EGDALSFHAF DLLELEGEDL 

       370        380        390        400        410        420 
KPLPNVERKQ KLAALLAGVS PPIHVADHII GGGEKLLGAL CGAGQEGIIC KRADAAYAGK 

       430        440        450        460        470        480 
RTQNWLKVKC VARQEFIVVG FTRSSARRRP FASLLLAQRE GKALVYKGKV GTGFDEDLLQ 

       490        500        510        520        530        540 
DLATRFEALK VDEGPLDVPI TEARGVTWLK PELVAEIAFA EFTAEGRVRH ASFVGLREDK 

       550        560        570        580        590        600 
KAADVVPERP APLVVQPEIV PISNRERVIF PESGQTKGDL ADYYAAMAPA MLPFIANRPV 

       610        620        630        640        650        660 
SLVRCPQGRA RHCFFQKHDS GSFGEHVHHV PIREKDGNEE EYLFVSDAAG ILSCVQMGTI 

       670        680        690        700        710        720 
EFHGWCSLAS DVEAPERMVI DLDPDEGLDF NDVKRAARDI RDRLSDLGLV SFAMLSGGKG 

       730        740        750        760        770        780 
VHVVVPLRPD HTWEAHASFA ERFARALALA EPDRYVATMS KARRKGRIFI DWLRNRRGST 

       790        800        810        820        830        840 
AVMPYSARAR ANAPVAVPIA WEELDDFANA HPFCIGDTAG LLKRSEGKSL RGWGMAQQSL 


PDV 

« Hide

References

[1]"Complete sequence of Novosphingobium aromaticivorans DSM 12444."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N. expand/collapse author list , Fredrickson J., Balkwill D., Romine M.F., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 12444.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000248 Genomic DNA. Translation: ABD26135.1.
RefSeqYP_496969.1. NC_007794.1.

3D structure databases

ProteinModelPortalQ2G7N8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING279238.Saro_1695.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD26135; ABD26135; Saro_1695.
GeneID3916270.
KEGGnar:Saro_1695.
PATRIC22786070. VBINovAro50627_1730.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMADWTIRSI.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycNARO279238:GHBU-1720-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ2G7N8_NOVAD
AccessionPrimary (citable) accession number: Q2G7N8
Entry history
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)