Q2G7N8 (Q2G7N8_NOVAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module EMBL ABD26135.1

Gene names

Ordered Locus Names:

Saro_1695 EMBL ABD26135.1

Organism

Novosphingobium aromaticivorans (strain DSM 12444) [Complete proteome] [HAMAP] EMBL ABD26135.1

Taxonomic identifier

279238 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Sphingomonadales › Sphingomonadaceae › Novosphingobium › Sphingomonas aromaticivorans

Protein attributes

Sequence length	843 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABD26135.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q2G7N8 [UniParc]. Last modified March 21, 2006. Version 1. Checksum: CAED803A93AA2AD5	FASTA	843	93,005
	10 20 30 40 50 60 MGRNDPLAAY NAKRDFARTA EPAGKRKSSA TGNLFIVQKH DATRLHWDFR MEVDGVLKSW 70 80 90 100 110 120 AVTRGPSPDP DDKRLAVQTE DHPLEYARFE GIIPEGEYGG GTVMLWDKGT WEPVEGKSAK 130 140 150 160 170 180 DLEKGHLHFR LEGERMKGEW LLVRLKRRGN EKRDNWLLRK LDDAYAGQGD QLVERGLTSV 190 200 210 220 230 240 LTGRTMAEIA SDKAGSHSLK GKRGKAFASV MEEAGTHNRK VGKARGKAPS RARRNAPLPA 250 260 270 280 290 300 FQPVQLATLV DTVPDGRQWL YEIKFDGYRA LVAVRGTEVR VFTRSGLDWT EKFAPLARHL 310 320 330 340 350 360 AGLKLPSCLI DGEIVAADAD GNPDFSRLQA VLKRGHGEQG EGDALSFHAF DLLELEGEDL 370 380 390 400 410 420 KPLPNVERKQ KLAALLAGVS PPIHVADHII GGGEKLLGAL CGAGQEGIIC KRADAAYAGK 430 440 450 460 470 480 RTQNWLKVKC VARQEFIVVG FTRSSARRRP FASLLLAQRE GKALVYKGKV GTGFDEDLLQ 490 500 510 520 530 540 DLATRFEALK VDEGPLDVPI TEARGVTWLK PELVAEIAFA EFTAEGRVRH ASFVGLREDK 550 560 570 580 590 600 KAADVVPERP APLVVQPEIV PISNRERVIF PESGQTKGDL ADYYAAMAPA MLPFIANRPV 610 620 630 640 650 660 SLVRCPQGRA RHCFFQKHDS GSFGEHVHHV PIREKDGNEE EYLFVSDAAG ILSCVQMGTI 670 680 690 700 710 720 EFHGWCSLAS DVEAPERMVI DLDPDEGLDF NDVKRAARDI RDRLSDLGLV SFAMLSGGKG 730 740 750 760 770 780 VHVVVPLRPD HTWEAHASFA ERFARALALA EPDRYVATMS KARRKGRIFI DWLRNRRGST 790 800 810 820 830 840 AVMPYSARAR ANAPVAVPIA WEELDDFANA HPFCIGDTAG LLKRSEGKSL RGWGMAQQSL PDV

References

[1]

"Complete sequence of Novosphingobium aromaticivorans DSM 12444." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Kyrpides N., Ivanova N. , Fredrickson J., Balkwill D., Romine M.F., Richardson P. Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 12444.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000248 Genomic DNA. Translation: ABD26135.1.
RefSeq	YP_496969.1. NC_007794.1.
3D structure databases
ProteinModelPortal	Q2G7N8.
ModBase	Search...
Protein-protein interaction databases
STRING	279238.Saro_1695.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD26135; ABD26135; Saro_1695.
GeneID	3916270.
KEGG	nar:Saro_1695.
PATRIC	22786070. VBINovAro50627_1730.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000222509.
KO	K01971.
OMA	DWTIRSI.
ProtClustDB	CLSK944447.
Enzyme and pathway databases
BioCyc	NARO279238:GHBU-2388-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q2G7N8_NOVAD

Accession

Primary (citable) accession number: Q2G7N8

Entry history

Integrated into UniProtKB/TrEMBL:	March 21, 2006
Last sequence update:	March 21, 2006
Last modified:	May 1, 2013
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)