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Q2G7N8

- Q2G7N8_NOVAD

UniProt

Q2G7N8 - Q2G7N8_NOVAD

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Protein
Submitted name: ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module
Gene
Saro_1695
Organism
Novosphingobium aromaticivorans (strain DSM 12444 / F199)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNARO279238:GHBU-1720-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase moduleImported
Gene namesi
Ordered Locus Names:Saro_1695Imported
OrganismiNovosphingobium aromaticivorans (strain DSM 12444 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
ProteomesiUP000009134: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi279238.Saro_1695.

Structurei

3D structure databases

ProteinModelPortaliQ2G7N8.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiDWTIRSI.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2G7N8-1 [UniParc]FASTAAdd to Basket

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MGRNDPLAAY NAKRDFARTA EPAGKRKSSA TGNLFIVQKH DATRLHWDFR    50
MEVDGVLKSW AVTRGPSPDP DDKRLAVQTE DHPLEYARFE GIIPEGEYGG 100
GTVMLWDKGT WEPVEGKSAK DLEKGHLHFR LEGERMKGEW LLVRLKRRGN 150
EKRDNWLLRK LDDAYAGQGD QLVERGLTSV LTGRTMAEIA SDKAGSHSLK 200
GKRGKAFASV MEEAGTHNRK VGKARGKAPS RARRNAPLPA FQPVQLATLV 250
DTVPDGRQWL YEIKFDGYRA LVAVRGTEVR VFTRSGLDWT EKFAPLARHL 300
AGLKLPSCLI DGEIVAADAD GNPDFSRLQA VLKRGHGEQG EGDALSFHAF 350
DLLELEGEDL KPLPNVERKQ KLAALLAGVS PPIHVADHII GGGEKLLGAL 400
CGAGQEGIIC KRADAAYAGK RTQNWLKVKC VARQEFIVVG FTRSSARRRP 450
FASLLLAQRE GKALVYKGKV GTGFDEDLLQ DLATRFEALK VDEGPLDVPI 500
TEARGVTWLK PELVAEIAFA EFTAEGRVRH ASFVGLREDK KAADVVPERP 550
APLVVQPEIV PISNRERVIF PESGQTKGDL ADYYAAMAPA MLPFIANRPV 600
SLVRCPQGRA RHCFFQKHDS GSFGEHVHHV PIREKDGNEE EYLFVSDAAG 650
ILSCVQMGTI EFHGWCSLAS DVEAPERMVI DLDPDEGLDF NDVKRAARDI 700
RDRLSDLGLV SFAMLSGGKG VHVVVPLRPD HTWEAHASFA ERFARALALA 750
EPDRYVATMS KARRKGRIFI DWLRNRRGST AVMPYSARAR ANAPVAVPIA 800
WEELDDFANA HPFCIGDTAG LLKRSEGKSL RGWGMAQQSL PDV 843
Length:843
Mass (Da):93,005
Last modified:March 21, 2006 - v1
Checksum:iCAED803A93AA2AD5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000248 Genomic DNA. Translation: ABD26135.1.
RefSeqiYP_496969.1. NC_007794.1.

Genome annotation databases

EnsemblBacteriaiABD26135; ABD26135; Saro_1695.
GeneIDi3916270.
KEGGinar:Saro_1695.
PATRICi22786070. VBINovAro50627_1730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000248 Genomic DNA. Translation: ABD26135.1 .
RefSeqi YP_496969.1. NC_007794.1.

3D structure databases

ProteinModelPortali Q2G7N8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 279238.Saro_1695.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD26135 ; ABD26135 ; Saro_1695 .
GeneIDi 3916270.
KEGGi nar:Saro_1695.
PATRICi 22786070. VBINovAro50627_1730.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi DWTIRSI.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci NARO279238:GHBU-1720-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12444.

Entry informationi

Entry nameiQ2G7N8_NOVAD
AccessioniPrimary (citable) accession number: Q2G7N8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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