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Protein
Submitted name:

Putative membrane protein

Gene

Saro_2880

Organism
Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi2 – 21Calcium; via carbonyl oxygenCombined sources
Metal bindingi7 – 71CalciumCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciNARO279238:GHBU-2946-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative membrane proteinImported
Gene namesi
Ordered Locus Names:Saro_2880Imported
OrganismiNovosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CIP 105152 / NBRC 16084 / F199)Imported
Taxonomic identifieri279238 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaSphingomonadalesSphingomonadaceaeNovosphingobium
Proteomesi
  • UP000009134 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi279238.Saro_2880.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3G0KX-ray1.30A1-129[»]
ProteinModelPortaliQ2G4A7.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ2G4A7.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini17 – 11195Cyclase_SnoaL-like_domInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4108Y5J. Bacteria.
COG4922. LUCA.
HOGENOMiHOG000208328.
OMAiITHTHVE.
OrthoDBiPOG091H0MCD.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
InterProiIPR009959. Cyclase_SnoaL-like_dom.
IPR032710. NTF2-like_dom.
[Graphical view]
PfamiPF12680. SnoaL_2. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2G4A7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARTAEEQAN HDLVIEMYNK VLIAMDSSAV DRYIAPGYVQ HSSLAEPSVE
60 70 80 90 100
ALKGFLDRVR AESPDARQTI HRSFVDGDHV ITHTHVERWP GDAGLAVVDI
110 120
FRVEGGMIVE HWDVIQDVPA NPVNPNSMF
Length:129
Mass (Da):14,376
Last modified:March 21, 2006 - v1
Checksum:i4260FA022DF4D0CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD27316.1.
RefSeqiWP_011446520.1. NC_007794.1.

Genome annotation databases

EnsemblBacteriaiABD27316; ABD27316; Saro_2880.
KEGGinar:Saro_2880.
PATRICi22788580. VBINovAro50627_2947.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000248 Genomic DNA. Translation: ABD27316.1.
RefSeqiWP_011446520.1. NC_007794.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3G0KX-ray1.30A1-129[»]
ProteinModelPortaliQ2G4A7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi279238.Saro_2880.

Protocols and materials databases

DNASUi3915519.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD27316; ABD27316; Saro_2880.
KEGGinar:Saro_2880.
PATRICi22788580. VBINovAro50627_2947.

Phylogenomic databases

eggNOGiENOG4108Y5J. Bacteria.
COG4922. LUCA.
HOGENOMiHOG000208328.
OMAiITHTHVE.
OrthoDBiPOG091H0MCD.

Enzyme and pathway databases

BioCyciNARO279238:GHBU-2946-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ2G4A7.

Family and domain databases

Gene3Di3.10.450.50. 1 hit.
InterProiIPR009959. Cyclase_SnoaL-like_dom.
IPR032710. NTF2-like_dom.
[Graphical view]
PfamiPF12680. SnoaL_2. 1 hit.
[Graphical view]
SUPFAMiSSF54427. SSF54427. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ2G4A7_NOVAD
AccessioniPrimary (citable) accession number: Q2G4A7
Entry historyi
Integrated into UniProtKB/TrEMBL: March 21, 2006
Last sequence update: March 21, 2006
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.