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Protein

50S ribosomal protein L24

Gene

rplX

Organism
Staphylococcus aureus (strain NCTC 8325)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation
One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L24UniRule annotation
Gene namesi
Name:rplXUniRule annotation
Ordered Locus Names:SAOUHSC_02501
OrganismiStaphylococcus aureus (strain NCTC 8325)
Taxonomic identifieri93061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000008816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000523181 – 10550S ribosomal protein L24Add BLAST105

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02501.

Structurei

Secondary structure

1105
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi6 – 10Combined sources5
Beta strandi12 – 14Combined sources3
Beta strandi20 – 22Combined sources3
Beta strandi25 – 27Combined sources3
Helixi28 – 30Combined sources3
Beta strandi32 – 34Combined sources3
Beta strandi36 – 40Combined sources5
Beta strandi48 – 50Combined sources3
Beta strandi63 – 65Combined sources3
Beta strandi85 – 90Combined sources6
Beta strandi91 – 94Combined sources4
Beta strandi96 – 99Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
4WCEX-ray3.53R1-105[»]
4WF9X-ray3.43R1-105[»]
4WFAX-ray3.39R1-105[»]
4WFBX-ray3.43R1-105[»]
5HKVX-ray3.66R1-105[»]
5HL7X-ray3.55R1-105[»]
5LI0electron microscopy3.80X3-102[»]
5ND8electron microscopy3.70X1-105[»]
5ND9electron microscopy3.70X1-105[»]
5NRGX-ray3.44R1-105[»]
5TCUelectron microscopy3.90L72-104[»]
ProteinModelPortaliQ2FW17.
SMRiQ2FW17.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL24 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105KAR. Bacteria.
COG0198. LUCA.
HOGENOMiHOG000039891.
KOiK02895.
OMAiPQGGIVE.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
HAMAPiMF_01326_B. Ribosomal_L24_B. 1 hit.
InterProiView protein in InterPro
IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR003256. Ribosomal_L24.
IPR005825. Ribosomal_L24/26_CS.
IPR008991. Translation_prot_SH3-like.
PfamiView protein in Pfam
PF00467. KOW. 1 hit.
PF17136. ribosomal_L24. 1 hit.
SMARTiView protein in SMART
SM00739. KOW. 1 hit.
SUPFAMiSSF50104. SSF50104. 1 hit.
TIGRFAMsiTIGR01079. rplX_bact. 1 hit.
PROSITEiView protein in PROSITE
PS01108. RIBOSOMAL_L24. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2FW17-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHIKKGDNVK VIAGKDKGKE GKVIATLPKK DRVVVEGVNI MKKHQKPTQL
60 70 80 90 100
NPEGGILETE AAIHVSNVQL LDPKTNEPTR VGYKFVDGKK VRIAKKSGEE

IKSNN
Length:105
Mass (Da):11,536
Last modified:March 21, 2006 - v1
Checksum:i30DE6E9B3BF74B50
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000253 Genomic DNA. Translation: ABD31519.1.
RefSeqiWP_000547687.1. NC_007795.1.
YP_500968.1. NC_007795.1.

Genome annotation databases

EnsemblBacteriaiABD31519; ABD31519; SAOUHSC_02501.
GeneIDi31214973.
3920877.
KEGGisao:SAOUHSC_02501.
PATRICifig|93061.5.peg.2256.

Similar proteinsi

Entry informationi

Entry nameiRL24_STAA8
AccessioniPrimary (citable) accession number: Q2FW17
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 21, 2006
Last modified: October 25, 2017
This is version 85 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families