Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Staphylococcus aureus (strain NCTC 8325)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S3UniRule annotation
Gene namesi
Name:rpsCUniRule annotation
Ordered Locus Names:SAOUHSC_02506
OrganismiStaphylococcus aureus (strain NCTC 8325)
Taxonomic identifieri93061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000008816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002938911 – 21730S ribosomal protein S3Add BLAST217

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.UniRule annotation

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02506.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5LI0electron microscopy3.80c1-217[»]
5ND8electron microscopy3.70c1-217[»]
5ND9electron microscopy3.70c1-217[»]
5TCUelectron microscopy3.90SB2-203[»]
ProteinModelPortaliQ2FW12.
SMRiQ2FW12.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 106KH type-2UniRule annotationAdd BLAST69

Sequence similaritiesi

Belongs to the universal ribosomal protein uS3 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CKE. Bacteria.
COG0092. LUCA.
HOGENOMiHOG000210610.
KOiK02982.
OMAiKTNPIGN.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B. 1 hit.
InterProiView protein in InterPro
IPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR036419. Ribosomal_S3_C_sf.
IPR018280. Ribosomal_S3_CS.
PANTHERiPTHR11760:SF19. PTHR11760:SF19. 1 hit.
PfamiView protein in Pfam
PF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
SMARTiView protein in SMART
SM00322. KH. 1 hit.
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiView protein in PROSITE
PS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2FW12-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGQKINPIGL RVGIIRDWEA KWYAEKDFAS LLHEDLKIRK FIDNELKEAS
60 70 80 90 100
VSHVEIERAA NRINIAIHTG KPGMVIGKGG SEIEKLRNKL NALTDKKVHI
110 120 130 140 150
NVIEIKKVDL DARLVAENIA RQLENRASFR RVQKQAITRA MKLGAKGIKT
160 170 180 190 200
QVSGRLGGAD IARAEQYSEG TVPLHTLRAD IDYAHAEADT TYGKLGVKVW
210
IYRGEVLPTK NTSGGGK
Length:217
Mass (Da):24,100
Last modified:March 21, 2006 - v1
Checksum:i174CA582EB0DF917
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000253 Genomic DNA. Translation: ABD31524.1.
RefSeqiWP_000529877.1. NC_007795.1.
YP_500973.1. NC_007795.1.

Genome annotation databases

EnsemblBacteriaiABD31524; ABD31524; SAOUHSC_02506.
GeneIDi31214978.
3920882.
KEGGisao:SAOUHSC_02506.
PATRICifig|93061.5.peg.2261.

Similar proteinsi

Entry informationi

Entry nameiRS3_STAA8
AccessioniPrimary (citable) accession number: Q2FW12
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 10, 2007
Last sequence update: March 21, 2006
Last modified: October 25, 2017
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families