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Protein

HTH-type transcriptional regulator SAOUHSC_02897

Gene

SAOUHSC_02897

Organism
Staphylococcus aureus (strain NCTC 8325)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi29 – 48H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSAUR93061:GIWJ-2699-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator SAOUHSC_02897
Gene namesi
Ordered Locus Names:SAOUHSC_02897
OrganismiStaphylococcus aureus (strain NCTC 8325)
Taxonomic identifieri93061 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesStaphylococcaceaeStaphylococcus
Proteomesi
  • UP000008816 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002866961 – 185HTH-type transcriptional regulator SAOUHSC_02897Add BLAST185

Interactioni

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02897.

Structurei

3D structure databases

ProteinModelPortaliQ2FV42.
SMRiQ2FV42.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 66HTH tetR-typePROSITE-ProRule annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4108ZFV. Bacteria.
ENOG4111NTM. LUCA.
HOGENOMiHOG000280290.
OMAiDAIENRQ.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q2FV42-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKDAKENRQ RIEEIAHKLF DEEGVENISM NRIAKELGIG MGTLYRHFKD
60 70 80 90 100
KSDLCYYVIQ RDLDIFITHF KQIKDDYHSN YEVMQVSLDY LLQFKIDNKA
110 120 130 140 150
LLQCIEAGNN KLRFYQSAFY QELFDFYYDL FKSDDDTYTK FKTDMLLQSL
160 170 180
STSVFAFQIE HRHISIEAYR NYLLNIYLDE VGRND
Length:185
Mass (Da):22,260
Last modified:March 21, 2006 - v1
Checksum:iB61F5B984ECAD14F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000253 Genomic DNA. Translation: ABD31893.1.
RefSeqiWP_001224188.1. NC_007795.1.
YP_501350.1. NC_007795.1.

Genome annotation databases

EnsemblBacteriaiABD31893; ABD31893; SAOUHSC_02897.
GeneIDi28379787.
3921349.
KEGGisao:SAOUHSC_02897.
PATRICi19583025. VBIStaAur99865_2618.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000253 Genomic DNA. Translation: ABD31893.1.
RefSeqiWP_001224188.1. NC_007795.1.
YP_501350.1. NC_007795.1.

3D structure databases

ProteinModelPortaliQ2FV42.
SMRiQ2FV42.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi93061.SAOUHSC_02897.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD31893; ABD31893; SAOUHSC_02897.
GeneIDi28379787.
3921349.
KEGGisao:SAOUHSC_02897.
PATRICi19583025. VBIStaAur99865_2618.

Phylogenomic databases

eggNOGiENOG4108ZFV. Bacteria.
ENOG4111NTM. LUCA.
HOGENOMiHOG000280290.
OMAiDAIENRQ.

Enzyme and pathway databases

BioCyciSAUR93061:GIWJ-2699-MONOMER.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR023772. DNA-bd_HTH_TetR-type_CS.
IPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS01081. HTH_TETR_1. 1 hit.
PS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY2897_STAA8
AccessioniPrimary (citable) accession number: Q2FV42
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 15, 2007
Last sequence update: March 21, 2006
Last modified: November 2, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.