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Reviewed, UniProtKB/Swiss-Prot Q2FU45 (PGP_METHJ)

Last modified June 16, 2009. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Phosphoglycolate phosphatase
      Short name=PGPase
      Short name=PGP
    EC=3.1.3.18
Gene names
Ordered Locus Names: Mhun_2939
OrganismMethanospirillum hungatei (strain JF-1 / DSM 864) [Complete proteome] [HAMAP]
Taxonomic identifier323259 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Methanospirillaceae › Methanospirillum

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Protein attributes

Sequence length232 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Function

Catalyzes the dephosphorylation of 2-phosphoglycolate By similarity.

Catalytic activity

2-phosphoglycolate + H2O = glycolate + phosphate. HAMAP MF_01419

Cofactor

Magnesium By similarity.

Sequence similarities

Belongs to the archaeal SPP-like hydrolase family.

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Ontologies

Keywords
   Biological processCarbohydrate metabolism
   LigandMagnesium
Metal-binding
   Molecular functionHydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionmagnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

phosphoglycolate phosphatase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 232232Phosphoglycolate phosphatase HAMAP MF_01419
PRO_1000024290

Sites

Active site81Nucleophile By similarity
Metal binding81Magnesium By similarity
Metal binding101Magnesium By similarity
Metal binding1781Magnesium By similarity
Metal binding1821Magnesium By similarity
Binding site1551Substrate By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q2FU45-1 [UniParc].

Last modified March 21, 2006. Version 1.
Checksum: F29A4BEF8D2BC7DB

FASTA23225,482
        10         20         30         40         50         60 
MLRGVITDID GTLTDEKRRL STAAIETIRK LQEGGIEVVL SSGNTSCLLK GLCKLIGTGG 

        70         80         90        100        110        120 
TFIGENGGVY RIGFQGSMQV MANRDIAVKA LNLLEEYYGK KGIRLELYSH QERYSDIAFA 

       130        140        150        160        170        180 
REVPVEEVRS LLSGWPVDIM DTNFAIHIHE AGIDKGRTFH IVAEQLGIKP DEFLGIGDSE 

       190        200        210        220        230 
NDIGMIKAAG TGCCVANAQE DVRNISDYCS SVPYGEGFVE IMRMYFPHIL AR

« Hide

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References

[1]"Complete sequence of Methanospirillum hungatei JF-1."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. expand/collapse author list , Kyrpides N., Ivanova N., McInerney M.J., Brockman F., Culley D., Ferry J.G., Gunsalus R.P., Morrison M., Plugge C., Scholten J., Stams A.J.M., Boone D.R., Richardson P.
Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

CP000254 Genomic DNA. Translation: ABD42631.1.
RefSeqYP_504350.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID3925106.
GenomeReviewsGene locus Mhun_2939 in contig CP000254_GR.
KEGGmhu:Mhun_2939.
NMPDRfig|323259.5.peg.3076.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ2FU45.
OMAQ2FU45. VIDTGFA.

Enzyme and pathway databases

BioCycMHUN323259:MHUN_2939-MON.

Family and domain databases

HAMAPMF_01419.
[Tree]
InterProIPR013200. HAD-SF_hydro-like_3.
IPR006379. HAD-SF_hydro_IIB.
IPR006382. SPPlik_hydro_arc.
IPR006378. Suc_phosP.
[Graphical view]
PfamPF08282. Hydrolase_3. 1 hit.
[Graphical view]
TIGRFAMsTIGR01484. HAD-SF-IIB. 1 hit.
TIGR01487. SPP-like. 1 hit.
TIGR01482. SPP-subfamily. 1 hit.
ProtoNetSearch...

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Entry information

Entry namePGP_METHJ
AccessionPrimary (citable) accession number: Q2FU45
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 21, 2006
Last modified: June 16, 2009
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents