Q2FU45 (PGP_METHJ) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 41.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Phosphoglycolate phosphatase Short name=PGP Short name=PGPase EC=3.1.3.18 | ||
| Gene names |
| ||
| Organism | Methanospirillum hungatei (strain JF-1 / DSM 864) | ||
| Taxonomic identifier | 323259 [NCBI] | ||
| Taxonomic lineage | Archaea › Euryarchaeota › Methanomicrobia › Methanomicrobiales › Methanospirillaceae › Methanospirillum |
Protein attributes
| Sequence length | 232 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Catalyzes the dephosphorylation of 2-phosphoglycolate By similarity. HAMAP MF_01419 |
| Catalytic activity | 2-phosphoglycolate + H2O = glycolate + phosphate. HAMAP MF_01419 |
| Cofactor | Magnesium By similarity. HAMAP MF_01419 |
| Sequence similarities | Belongs to the archaeal SPP-like hydrolase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism |
| Ligand | Magnesium Metal-binding |
| Molecular function | Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | magnesium ion binding Inferred from electronic annotation. Source: InterPro phosphoglycolate phosphatase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 232 | 232 | Phosphoglycolate phosphatase HAMAP MF_01419 | PRO_1000024290 | |||||
Sites | |||||||||
| Active site | 8 | 1 | Nucleophile By similarity | ||||||
| Metal binding | 8 | 1 | Magnesium By similarity | ||||||
| Metal binding | 10 | 1 | Magnesium By similarity | ||||||
| Metal binding | 178 | 1 | Magnesium By similarity | ||||||
| Metal binding | 182 | 1 | Magnesium By similarity | ||||||
| Binding site | 155 | 1 | Substrate By similarity | ||||||
Sequences
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References
| [1] | "Complete sequence of Methanospirillum hungatei JF-1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Kiss H., Schmutz J., Larimer F., Land M. Richardson P.Submitted (JAN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JF-1 / DSM 864. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000254 Genomic DNA. Translation: ABD42631.1. |
| RefSeq | YP_504350.1. NC_007796.1. |
3D structure databases | |
| ProteinModelPortal | Q2FU45. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q2FU45. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 3925106. |
| GenomeReviews | Gene locus Mhun_2939 in contig CP000254_GR. |
| KEGG | mhu:Mhun_2939. |
| NMPDR | fig|323259.5.peg.3076. |
Phylogenomic databases | |
| eggNOG | arNOG09493. |
| HOGENOM | HBG551920. |
| OMA | IDTGFAI. |
| PhylomeDB | Q2FU45. |
| ProtClustDB | CLSK949941. |
Enzyme and pathway databases | |
| BioCyc | MHUN323259:MHUN_2939-MONOMER. |
Family and domain databases | |
| HAMAP | MF_01419. GPH_hydrolase_arch. [Tree] |
| InterPro | IPR023214. HAD-like_dom. IPR013200. HAD-SF_hydro-like_3. IPR006382. SPPlik_hydro_arc. IPR006378. Suc_phosP. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1000. HAD-like_dom. 2 hits. |
| KO | K07024. |
| Pfam | PF08282. Hydrolase_3. 2 hits. [Graphical view] |
| SUPFAM | SSF56784. HAD-like_dom. 1 hit. |
| TIGRFAMs | TIGR01487. SPP-like. 1 hit. TIGR01482. SPP-subfamily. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | PGP_METHJ | ||||||||
| Accession | Primary (citable) accession number: Q2FU45 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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