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Protein

50S ribosomal protein L18e

Gene

rpl18e

Organism
Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18eUniRule annotation
Gene namesi
Name:rpl18eUniRule annotation
Ordered Locus Names:Mhun_2898
OrganismiMethanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)
Taxonomic identifieri323259 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanospirillaceaeMethanospirillum
Proteomesi
  • UP000001941 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000050431 – 12150S ribosomal protein L18eAdd BLAST121

Interactioni

Protein-protein interaction databases

STRINGi323259.Mhun_2898.

Structurei

3D structure databases

ProteinModelPortaliQ2FTA2.
SMRiQ2FTA2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eukaryotic ribosomal protein eL18 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG00780. Archaea.
COG1727. LUCA.
HOGENOMiHOG000225300.
KOiK02883.
OMAiVAAWKFS.
OrthoDBiPOG093Z0GOZ.

Family and domain databases

HAMAPiMF_00329. Ribosomal_L18e. 1 hit.
InterProiView protein in InterPro
IPR000039. Ribosomal_L18e.
IPR021131. Ribosomal_L18e/L15P.
IPR022947. Ribosomal_L18e_arc.
PANTHERiPTHR10934. PTHR10934. 1 hit.
PfamiView protein in Pfam
PF17135. Ribosomal_L18. 1 hit.
SUPFAMiSSF52080. SSF52080. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2FTA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRRNDKSNP RLAELIRLLK QTSRENEVEI WSDIASRLEK SRKNYAEVNV
60 70 80 90 100
SKINRYAQEG ETLIVPGKVL GSGVVEAGVT VAALSFSDAA VSKITEAKGQ
110 120
CISIEQLLSQ NPKGSRTRIL R
Length:121
Mass (Da):13,383
Last modified:March 21, 2006 - v1
Checksum:i2EC520A2BB2A2B57
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000254 Genomic DNA. Translation: ABD42590.1.
RefSeqiWP_011449843.1. NC_007796.1.

Genome annotation databases

EnsemblBacteriaiABD42590; ABD42590; Mhun_2898.
GeneIDi3924459.
KEGGimhu:Mhun_2898.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRL18E_METHJ
AccessioniPrimary (citable) accession number: Q2FTA2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: March 21, 2006
Last modified: April 12, 2017
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families