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Q2FS97

- IF6_METHJ

UniProt

Q2FS97 - IF6_METHJ

Protein

Translation initiation factor 6

Gene

eif6

Organism
Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 48 (01 Oct 2014)
      Sequence version 1 (21 Mar 2006)
      Previous versions | rss
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    Functioni

    Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

    GO - Molecular functioni

    1. ribosome binding Source: InterPro
    2. translation initiation factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. mature ribosome assembly Source: InterPro

    Keywords - Molecular functioni

    Initiation factor

    Keywords - Biological processi

    Protein biosynthesis

    Enzyme and pathway databases

    BioCyciMHUN323259:GH0L-3065-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Translation initiation factor 6UniRule annotation
    Short name:
    aIF-6UniRule annotation
    Gene namesi
    Name:eif6UniRule annotation
    Ordered Locus Names:Mhun_3020
    OrganismiMethanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1)
    Taxonomic identifieri323259 [NCBI]
    Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanomicrobialesMethanospirillaceaeMethanospirillum
    ProteomesiUP000001941: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 221221Translation initiation factor 6PRO_0000259431Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi323259.Mhun_3020.

    Structurei

    3D structure databases

    ProteinModelPortaliQ2FS97.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the eIF-6 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1976.
    HOGENOMiHOG000230604.
    KOiK03264.
    OMAiNDWCAFT.

    Family and domain databases

    HAMAPiMF_00032. eIF_6.
    InterProiIPR002769. eIF6.
    [Graphical view]
    PANTHERiPTHR10784. PTHR10784. 1 hit.
    PfamiPF01912. eIF-6. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006413. IF-6. 1 hit.
    SMARTiSM00654. eIF6. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00323. eIF-6. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q2FS97-1 [UniParc]FASTAAdd to Basket

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    MDRFVSIAGD PHIGVFTRVF DDIAVVPPDV PEEVTTRYEE ALKVEIVRTT    50
    IQRSPIIGSL LVGNNNGLVI TGMATEEEIA TLSEYRDLML LEEGMNAAGN 100
    IILANDHFAA VHPEMDEEFM DALSDFLKVP VIPLTLGDVK TVGMAAVATN 150
    SGVVVSPRTT PGEIQRLEQV CSLPVGKGTV TMGNAMVGTG LVANRYGYLA 200
    GVGTSGYELG RIEDILGFEE E 221
    Length:221
    Mass (Da):23,654
    Last modified:March 21, 2006 - v1
    Checksum:i24D7E3CADEC1F112
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000254 Genomic DNA. Translation: ABD42707.1.
    RefSeqiYP_504426.1. NC_007796.1.

    Genome annotation databases

    EnsemblBacteriaiABD42707; ABD42707; Mhun_3020.
    GeneIDi3922842.
    KEGGimhu:Mhun_3020.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000254 Genomic DNA. Translation: ABD42707.1 .
    RefSeqi YP_504426.1. NC_007796.1.

    3D structure databases

    ProteinModelPortali Q2FS97.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 323259.Mhun_3020.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD42707 ; ABD42707 ; Mhun_3020 .
    GeneIDi 3922842.
    KEGGi mhu:Mhun_3020.

    Phylogenomic databases

    eggNOGi COG1976.
    HOGENOMi HOG000230604.
    KOi K03264.
    OMAi NDWCAFT.

    Enzyme and pathway databases

    BioCyci MHUN323259:GH0L-3065-MONOMER.

    Family and domain databases

    HAMAPi MF_00032. eIF_6.
    InterProi IPR002769. eIF6.
    [Graphical view ]
    PANTHERi PTHR10784. PTHR10784. 1 hit.
    Pfami PF01912. eIF-6. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006413. IF-6. 1 hit.
    SMARTi SM00654. eIF6. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00323. eIF-6. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27890 / DSM 864 / NBRC 100397 / JF-1.

    Entry informationi

    Entry nameiIF6_METHJ
    AccessioniPrimary (citable) accession number: Q2FS97
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: October 31, 2006
    Last sequence update: March 21, 2006
    Last modified: October 1, 2014
    This is version 48 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Translation initiation factors
      List of translation initiation factor entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3