Putative uncharacterized protein - Oceanicola granulosus HTCC2516

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EAR50054.1

Gene names

ORF Names:

OG2516_08446 EMBL EAR50054.1

Organism

Oceanicola granulosus HTCC2516 EMBL EAR50054.1

Taxonomic identifier

314256 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Oceanicola ›

Protein attributes

Sequence length	206 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Ligand	Iron PDB 2RG4 Metal-binding PDB 2RG4
Technical term	3D-structure PDB 2RG4
Gene Ontology (GO)
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Sites

Metal binding

117

1

Iron; via tele nitrogen PDB 2RG4

Metal binding

119

1

Iron; via tele nitrogen PDB 2RG4

Metal binding

185

1

Iron; via tele nitrogen PDB 2RG4

Sequences

Sequence

Length

Mass (Da)

Tools

Q2CBJ1 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 481352981453EB56
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FASTA

206

23,079

        10         20         30         40         50         60 
MAQIKSLFAT RLYHAPLSEH GPALDPAEFA ASCYSIAEDD DAGQEWCERE GYPGYTSYAS 

        70         80         90        100        110        120 
LTDLPWRFPI FADLVKSLDA HVAAFAEDLE FELDGKALRL EDIWINILPE GGVHGSHIHP 

       130        140        150        160        170        180 
HSVISGTTYV AMPEGTSALK LEDPRLPFMM AAPTRRKGAR EELRTFRSVA PKVGDVLLWE 

       190        200 
SWLRHEVPMN MAEEDRISVS FNYAWG

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References

[1]	"Crystal structure of the uncharacterized protein Q2CBJ1_9RHOB from Oceanicola granulosus HTCC2516." Malashkevich V.N., Toro R., Meyer A.J., Sauder J.M., Burley S.K., Almo S.C. Submitted (OCT-2007) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 2-206 IN COMPLEX WITH IRON.
[2]	"Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta)." Thrash J.C., Cho J.C., Vergin K.L., Giovannoni S.J. J. Bacteriol. 192:3549-3550(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: HTCC2516 EMBL EAR50054.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AAOT01000038 Genomic DNA. Translation: EAR50054.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2RG4	X-ray	1.90	A/B	2-206	[»]

ProteinModelPortal

Q2CBJ1.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Genome annotation databases

EnsemblBacteria

EAR50054; EAR50054; OG2516_08446.

PATRIC

28499997. VBIOceGra115923_1337.

Family and domain databases

InterPro

IPR012668. CHP02466.
[Graphical view]

TIGRFAMs

TIGR02466. TIGR02466. 1 hit.

ProtoNet

Search...

Other

EvolutionaryTrace

Q2CBJ1.

Entry information

Entry name

Q2CBJ1_9RHOB

Accession

Primary (citable) accession number: Q2CBJ1

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	April 3, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)