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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Francisella tularensis subsp. holarctica (strain LVS)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:FTL_1187
OrganismiFrancisella tularensis subsp. holarctica (strain LVS)
Taxonomic identifieri376619 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000553821 – 14250S ribosomal protein L13Add BLAST142

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ2A332.
SMRiQ2A332.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UM5. Bacteria.
COG0102. LUCA.
HOGENOMiHOG000225286.
KOiK02871.
OMAiVLMGKHK.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q2A332-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFTAKPSN IKREWLLIDA TDKTLGRLAT EVAMILRGKN KPEYTPHMDT
60 70 80 90 100
GDYVVIVNAE KVAVTGNKRK AKTYYHHTGY IGGIKSVSFE KLIATHPERA
110 120 130 140
IEKAVRGMLP RTPLGRTMFK KLKVYAGEAH PHTAQQPKAH NI
Length:142
Mass (Da):15,938
Last modified:April 4, 2006 - v1
Checksum:i861F420B528E4C8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM233362 Genomic DNA. Translation: CAJ79626.1.
RefSeqiWP_003016252.1. NZ_CP009694.1.

Genome annotation databases

EnsemblBacteriaiCAJ79626; CAJ79626; FTL_1187.
KEGGiftl:FTL_1187.

Similar proteinsi

Entry informationi

Entry nameiRL13_FRATH
AccessioniPrimary (citable) accession number: Q2A332
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: April 4, 2006
Last modified: October 25, 2017
This is version 74 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families