Q29NZ1 (Q29NZ1_DROPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GA12250 EMBL EAL34502.1

Gene names

Name:	GA12250 FlyBase FBgn0072296
Synonyms:	Dpse\GA12250 EMBL EAL34502.1
ORF Names:	Dpse_GA12250 EMBL EAL34502.1

Organism

Drosophila pseudoobscura pseudoobscura (Fruit fly)

Taxonomic identifier

46245 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	966 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	alanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro alanine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q29NZ1 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 4D9DCE5176008088	FASTA	966	107,917
	10 20 30 40 50 60 MKFLTAKEVR DAYLGFFKEQ KHIYVHSSST IPLDDPTLLF ANAGMNQYKP IFLGTADPNS 70 80 90 100 110 120 EMSKWVRVCN TQKCIRAGGK HNDLDDVGKD VYHHTFFEML GNWSFGDYFK KEICTWAWEF 130 140 150 160 170 180 LTNRLHLPKD RLYVTYFGGD EASGLEPDLE CKQLWLDLGL KPEHILPGSM KDNFWEMGET 190 200 210 220 230 240 GPCGPCSELH FDRIGGRSVP ELVNMDDPDV LEIWNLVFIQ YNRESDGSLK QLPKKHIDCG 250 260 270 280 290 300 MGFERLVSVI QNKRSNYDTD LFVPLFEAIQ AGTGAPAYQG RVGADDVDGI DMAYRVLADH 310 320 330 340 350 360 ARTITIALAD GGTPDNTGRG YVLRRILRRA VRYATEKLNA KPGFFGTLVN TVVDLLGDAF 370 380 390 400 410 420 PEVKKDPQHI IDIINEEELQ FLKTLTRGRN LLNRTIEKLG SQSIIPGDVA WRLYDTYGFP 430 440 450 460 470 480 VDLTQLMAEE KSLEIDMAGY EAAKQNSYVL SQGKGASKIE EINLDVHAIS QLQEQGVPPT 490 500 510 520 530 540 NDSFKYKYEA VSEERDSAYN YQECTSKIVA LRFENQFVNE ISNGQKAGIV LDKTNFYAES 550 560 570 580 590 600 GGQIFDQGAL VKLNDEANEF LVDRVYNRGG YILHIGVVEG TLKVGDELQL HIDEERRWLT 610 620 630 640 650 660 MKNHSATHAL NHCLLQVLGK DTEQKGSLVV PEKLRFDFNT KAAMTIEQVA KTEQLTKDMV 670 680 690 700 710 720 YKNVPIYAKE SKLALAKRIR GLRSVFDEVY PDPVRVISFG VPVDELEQNP DAEAGEQTSV 730 740 750 760 770 780 EFCGGTHLRR SGHIMDFVIS SEEAIAKGIR RIVALTGPEA LKAIKKSEAF EQEIVKLKAT 790 800 810 820 830 840 IDADKSGKDS KSHVKEIVEL TEQISHATVP YVKKDEMRNL LKGLKKTLDD KERSLRAAVS 850 860 870 880 890 900 VNVVERAKEL CEANPGANVL VQQLEAFNNT KALDAALKQV RTQLPDAAAM FFSVDADSKK 910 920 930 940 950 960 IFCLSSVPKS AVEKGLKANE WVQHVSPTLG GKGGGKPESA QASGSNYDRV EEIIQLATKF AQSKLA

References

[1]

"Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution." Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L. , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A. Genome Res. 15:1-18(2005) [PubMed: 15632085] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MV2-25 / Tucson 14011-0121.94.

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Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH379058 Genomic DNA. Translation: EAL34502.1.
RefSeq	XP_001357433.1. XM_001357397.2.
3D structure databases
ProteinModelPortal	Q29NZ1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4818093.
KEGG	dpo:Dpse_GA12250.
Organism-specific databases
FlyBase	FBgn0072296. Dpse\GA12250.
Phylogenomic databases
InParanoid	Q29NZ1.
OMA	VILEMES.
OrthoDB	EOG46M90G.
PhylomeDB	Q29NZ1.
Family and domain databases
HAMAP	MF_00036_B. Ala_tRNA_synth_B. [Tree]
InterPro	IPR002318. Ala-tRNA-synth_IIc. IPR018162. Ala-tRNA-synth_IIc_anticod-bd. IPR018165. Ala-tRNA-synth_IIc_core. IPR018164. Ala-tRNA-synth_IIc_N. IPR023033. Ala_tRNA_synth_euk/bac. IPR003156. Pesterase_DHHA1. IPR018163. Thr/Ala-tRNA-synth_IIc_edit. IPR012947. tRNA_SAD. [Graphical view]
KO	K01872.
Pfam	PF02272. DHHA1. 1 hit. PF01411. tRNA-synt_2c. 1 hit. PF07973. tRNA_SAD. 1 hit. [Graphical view]
PRINTS	PR00980. TRNASYNTHALA.
SMART	SM00863. tRNA_SAD. 1 hit. [Graphical view]
SUPFAM	SSF101353. Ala-tRNA-synth_IIc_anticod-bd. 1 hit. SSF55186. Thr/Ala-tRNA-synth_IIc_edit. 1 hit.
TIGRFAMs	TIGR00344. AlaS. 1 hit.
PROSITE	PS50860. AA_TRNA_LIGASE_II_ALA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q29NZ1_DROPS

Accession

Primary (citable) accession number: Q29NZ1

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)