Q29K73 (Q29K73_DROPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GA20603 EMBL EAL33304.2
EC=4.1.1.- EMBL EAL33304.2

Gene names

Name:	GA20603 FlyBase FBgn0080597
Synonyms:	Dpse\GA20603 EMBL EAL33304.2
ORF Names:	Dpse_GA20603 EMBL EAL33304.2

Organism

Drosophila pseudoobscura pseudoobscura (Fruit fly) [Reference proteome] EMBL EAL33304.2

Taxonomic identifier

46245 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Sophophora › obscura group › pseudoobscura subgroup › Drosophila pseudoobscura

Protein attributes

Sequence length	589 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL EAL33304.2
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q29K73 [UniParc]. Last modified October 14, 2008. Version 2. Checksum: CE9E1BE89D36EA88	FASTA	589	66,313
	10 20 30 40 50 60 MLASETFPAH RFKESIFKPY STSGSASVDD LASVNKTLTS AATTSSSPDT HAAVDIAPTA 70 80 90 100 110 120 SSVEFETARK MLTNNSSSSS NNSNNNNNNN NNDAKDDISG FVASHPAAPF EGFIRACVDE 130 140 150 160 170 180 IIKLAVFQGT NRSTKVVEWH EPAELRQLFD FQLRDKGEPQ EKLRELLRET IRFSVKTGHP 190 200 210 220 230 240 YFINQLYSGV DPYALVGQWL TDALNPSVYT YEVAPLFTLM EEQVLAEMRR IVGFPNGGQG 250 260 270 280 290 300 DGIFCPGGSI ANGYAISCAR YTHAPESKKN GLFNAKPLII FTSEDAHYSV EKLAMFMGFG 310 320 330 340 350 360 SEHVVKIATN EVGKMRLSDL EDQVRRCLDN GWQPLMVSAT AGTTVLGAFD DLTGIGDLCN 370 380 390 400 410 420 KYNMWMHVDA AWGGGALMSK KYRHLLNDIE RADSVTWNPH KLLAASQQCS TFLTRHQLVL 430 440 450 460 470 480 GQCHSTNAAY LFQKDKFYDT SYDTGDKHIQ CGRRADVFKF WFMWKAKGNL GLESHVEKVF 490 500 510 520 530 540 RMAEFFTAKV RERPGFELVL ESPECTNISF WYVPPSLRTM ERDREFYDKL HKVAPKVKER 550 560 570 580 MIKKGSMMIT YQPLRQLPNF FRLVLQNSCL EESDMIYFLD EIESLAKNL

References

[1]

"Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution." Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L. , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A. Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MV2-25 / Tucson 14011-0121.94.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH379061 Genomic DNA. Translation: EAL33304.2.
RefSeq	XP_001356242.2. XM_001356206.2.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7237.FBpp0287318.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0288880; FBpp0287318; FBgn0080597.
GeneID	4816279.
KEGG	dpo:Dpse_GA20603.
Organism-specific databases
FlyBase	FBgn0080597. Dpse\GA20603.
Phylogenomic databases
InParanoid	Q29K73.
KO	K01580.
OrthoDB	EOG43BK46.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q29K73_DROPS

Accession

Primary (citable) accession number: Q29K73

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	October 14, 2008
Last modified:	April 3, 2013
This is version 42 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)