Q296L0 (Q296L0_DROPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GA13194 EMBL EAL28447.2

Gene names

Name:	GA13194 FlyBase FBgn0073231
Synonyms:	Dpse\GA13194 EMBL EAL28447.2
ORF Names:	Dpse_GA13194 EMBL EAL28447.2

Organism

Drosophila pseudoobscura pseudoobscura (Fruit fly) [Reference proteome] EMBL EAL28447.2

Taxonomic identifier

46245 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Sophophora › obscura group › pseudoobscura subgroup › Drosophila pseudoobscura

Protein attributes

Sequence length	1340 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q296L0 [UniParc]. Last modified October 14, 2008. Version 2. Checksum: 2DAE08E1B5D038F2	FASTA	1,340	136,517
	10 20 30 40 50 60 MNHQARLSLS IMSPHHSNPI ADSTRIDGSP VAHRHSPANL IHRTMSLERS QSTTNGTPGN 70 80 90 100 110 120 RTASSTTTMS RQKLNLSLMD PKTFADVHSS GLASRIVAYH NDSTLGGRRG LQRSISVSNL 130 140 150 160 170 180 YNPLKQPRRT PSSPLPYRPS PPSLSMTRIA PPERSFYCGS TLPGLLRSNS VVGVHKVCNN 190 200 210 220 230 240 EHEQLSRENR PILHPHPPQH ESEPTRSVLE ELKEISRKRI NSGDTQKQHE IFKRSCHRIG 250 260 270 280 290 300 DFVDHHHHPP PATTFKRQRE LSVAVPLRHH HAATMVPPLA PPTQTQHHPQ PTEAVSPEQL 310 320 330 340 350 360 AKRRNCSYNN DIASSLSSSR RHVTKRKLYD MRESMRQTSM EGTANGSSPE NSPSAPVSKM 370 380 390 400 410 420 QRKTDAEPIA IAKSMPIVGV PVVAPSRTIS APAMGQQHQI NTELHRNTEV DLPLAASKPK 430 440 450 460 470 480 LTLFNTKQTQ QVQEQTKHYD LESPDVDAGE YAGINFVKPK QQNSLSGVKN PSVERTHKTK 490 500 510 520 530 540 LAIMLSGLRG EIYQGEEEEP DEMDAPVSPK TPIKPIVLTT TKAVSPNTAT KVSPSTITKT 550 560 570 580 590 600 TTTSSSDKPI ILSDKVIAPA PGTGTATATA TATTTMTNGL QPKLLFGQAP TPATATAAEG 610 620 630 640 650 660 ASPNESSKET PTAVNTAPTT SSSPAATPVL TFGSPKSTAT VIGAPLKTTS VFAPTSSAQA 670 680 690 700 710 720 PVLSFGKAPP VDTATPFKLE SNPTNKMNGI PTNGIATTSA STPAATASPA AMTFGSTITN 730 740 750 760 770 780 NAPSTAAFMF GKTEVSSAPA AAKPPVFSFG GSTAAAPTPT PTQTPTATAT PSPATGTGTS 790 800 810 820 830 840 LFGNSFGSAF KQPEANKAAT TVPEPAKPSA IIGVKPNFGG NSFGSAFKQP AATVTATAST 850 860 870 880 890 900 TAAEPTKAFS FTGTTNTAAA TTSNLFSFGS AAVAKPAEPA PAPAPAPAPA PTSGNIFGQS 910 920 930 940 950 960 ATASTPALFS FGGAAAASAS AAAPNTIKET KPAFAFGSDA SATTAVQSNG SNSSGSNNLF 970 980 990 1000 1010 1020 NFGAGVTSGA PPSFGGATST NAPSKSAFSF STAQKPTSQI GNNAAPTAAK PFAFGGGQPQ 1030 1040 1050 1060 1070 1080 VPGTTASTAG SAASPGGFSF VAAAGKKEAA TSGASLFGTP NNASTGVKPS FSFGGSSNNQ 1090 1100 1110 1120 1130 1140 QPNNAATSTP SAGQQQQSAP GQPGAFSFAA VAKKETSGAS IFGQPAAAAA ATPSASIKPS 1150 1160 1170 1180 1190 1200 FSFGGSSNNT QNAPSAHVAA PSFGGFGAPA VPATSNQSKP FAFGGTTTAA PNATPAIGGN 1210 1220 1230 1240 1250 1260 LFANAVSAVQ SQAKPGGFSF GGTTTKTNAP APPGNAPFSF GGAAAGGMAS PPSSQNVNTA 1270 1280 1290 1300 1310 1320 KPFSFGGGVS AFGSPSPSPV QAAAATNPGA GAFSFGSPAP PSASVAPGMS QQINAGNMFA 1330 1340 LPPSTSEQRP IRRATRRLQK

References

[1]

"Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution." Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L. , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A. Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MV2-25 / Tucson 14011-0121.94.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000070 Genomic DNA. Translation: EAL28447.2.
RefSeq	XP_001359302.2. XM_001359265.3.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0285936; FBpp0284374; FBgn0073231.
GeneID	4802373.
KEGG	dpo:Dpse_GA13194.
Organism-specific databases
FlyBase	FBgn0073231. Dpse\GA13194.
Phylogenomic databases
InParanoid	Q296L0.
KO	K14316.
OrthoDB	EOG48SF8Z.
Family and domain databases
InterPro	IPR026054. Nucleoporin. IPR026056. Put_NUP_drosophila. [Graphical view]
PANTHER	PTHR23193. PTHR23193. 1 hit. PTHR23193:SF6. PTHR23193:SF6. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q296L0_DROPS

Accession

Primary (citable) accession number: Q296L0

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	October 14, 2008
Last modified:	May 1, 2013
This is version 27 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)