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Protein

40S ribosomal protein S16

Gene

RPS16

Organism
Sus scrofa (Pig)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SSC-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SSC-72649 Translation initiation complex formation
R-SSC-72689 Formation of a pool of free 40S subunits
R-SSC-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-SSC-72702 Ribosomal scanning and start codon recognition
R-SSC-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SSC-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SSC-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S16
Gene namesi
Name:RPS16
OrganismiSus scrofa (Pig)
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001114811 – 14640S ribosomal protein S16Add BLAST146

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei3PhosphoserineBy similarity1
Modified residuei60N6-acetyllysineBy similarity1

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PaxDbiQ29201
PeptideAtlasiQ29201
PRIDEiQ29201

Expressioni

Gene expression databases

BgeeiENSSSCG00000020817
GenevisibleiQ29201 SS

Interactioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000027401

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3J7Pelectron microscopy3.50SQ1-146[»]
3J7Relectron microscopy3.90SQ1-146[»]
ProteinModelPortaliQ29201
SMRiQ29201
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1753 Eukaryota
COG0103 LUCA
GeneTreeiENSGT00390000013067
HOGENOMiHOG000019803
HOVERGENiHBG055171
InParanoidiQ29201
KOiK02960
OMAiFMGQAEA
OrthoDBiEOG091G0QRW
TreeFamiTF300088

Family and domain databases

Gene3Di3.30.230.10, 1 hit
InterProiView protein in InterPro
IPR020568 Ribosomal_S5_D2-typ_fold
IPR014721 Ribosomal_S5_D2-typ_fold_subgr
IPR000754 Ribosomal_S9
IPR020574 Ribosomal_S9_CS
PANTHERiPTHR21569 PTHR21569, 1 hit
PfamiView protein in Pfam
PF00380 Ribosomal_S9, 1 hit
SUPFAMiSSF54211 SSF54211, 1 hit
PROSITEiView protein in PROSITE
PS00360 RIBOSOMAL_S9, 1 hit

Sequencei

Sequence statusi: Complete.

Q29201-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPRTLQYK
60 70 80 90 100
LLEPVLLLGK ERFAGVDIRV RVKGGGHVAQ IYAIRQSISK ALVAYYQKYV
110 120 130 140
DEASKKEIKD ILIQYDRTLL VADPRRCESK KFGGPGARAR YQKSYR
Length:146
Mass (Da):16,445
Last modified:January 23, 2007 - v4
Checksum:i519BCFB91BB68A15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
F14526 mRNA Translation: CAA23106.1
AY550068 mRNA Translation: AAS55926.1
RefSeqiNP_001131092.1, NM_001137620.1
XP_003355952.1, XM_003355904.3
UniGeneiSsc.16651

Genome annotation databases

EnsembliENSSSCT00000024602; ENSSSCP00000027401; ENSSSCG00000020817
GeneIDi414397
KEGGissc:414397

Similar proteinsi

Entry informationi

Entry nameiRS16_PIG
AccessioniPrimary (citable) accession number: Q29201
Secondary accession number(s): Q6QAQ2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: April 25, 2018
This is version 113 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome
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Main funding by: National Institutes of Health