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Protein

Protein lingerer

Gene

lig

Organism
Drosophila pseudoobscura pseudoobscura (Fruit fly)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Acts in the nervous system to mediate the control of copulatory organs during courtship.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Behavior

Names & Taxonomyi

Protein namesi
Recommended name:
Protein lingerer
Gene namesi
Name:ligBy similarity
ORF Names:GA21277
OrganismiDrosophila pseudoobscura pseudoobscura (Fruit fly)
Taxonomic identifieri46245 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraEndopterygotaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
Proteomesi
  • UP000001819 Componentsi: Chromosome 3, Partially assembled WGS sequence

Organism-specific databases

FlyBaseiFBgn0081265. Dpse\GA21277.

Subcellular locationi

  • Cytoplasm By similarity

  • Note: Found in the cytoplasm of many neuronal and glial cells in the brain and ventral ganglion, and in imaginal disks.By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13271327Protein lingererPRO_0000314622Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei656 – 6561PhosphoserineBy similarity
Modified residuei657 – 6571PhosphothreonineBy similarity

Keywords - PTMi

Phosphoprotein

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini80 – 12041UBASequence analysisAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi171 – 270100Gly-richSequence analysisAdd
BLAST
Compositional biasi614 – 758145Gln-richAdd
BLAST
Compositional biasi687 – 937251Ser-richAdd
BLAST
Compositional biasi866 – 1021156Gly-richAdd
BLAST

Sequence similaritiesi

Contains 1 UBA domain.Sequence analysis

Phylogenomic databases

InParanoidiQ290X3.
OMAiPGTIMNG.
OrthoDBiEOG761BTB.

Family and domain databases

InterProiIPR022166. DUF3697_Uba2.
IPR009060. UBA-like.
[Graphical view]
PfamiPF12478. DUF3697. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.

Sequencei

Sequence statusi: Complete.

Q290X3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTQTRSGGG GGGGGNSRSQ KKSNSANVGG GTAHDAAPHA AANKKGDANK
60 70 80 90 100
TDKPEKAQPK ATTEQLRIAQ ITNSTTEDPQ INEKVTLLLT MTQRSEEEVC
110 120 130 140 150
CALNECDYDL EAAANFLIEE LPQGAFAKYE KKRKRPASTA ADGAAGDGEW
160 170 180 190 200
ADGNANADKR ENTRNRSSNR GGGRGGTDSR GWRGRETREN ERNTRESRGG
210 220 230 240 250
GGERGGERGD DRANDNYRGQ RNGGRSAPGG GGGRGGGFVS RSGRGGGRMG
260 270 280 290 300
GRSSGPRGDR TSGSGGFGAG RSSNANEDHH EVELWDNTIA QNAEKQQPGH
310 320 330 340 350
DDSWGDWNNE EYEGSLKDSK VFTTSNLSTQ TAAAVVSGGG AAAGAASSTG
360 370 380 390 400
SGGELSAPPG LEHHLGSMGT TGEDNSGSSG PPATPPSALS GSATTPLLQY
410 420 430 440 450
SAAVSNPPPQ MQSQGTQHSS GGGTAAGGGG SASSSFVSAA SDTFTSAASA
460 470 480 490 500
AATLVQQAQQ QQQLQQTTPI KPSATLSVEQ SQYFNSLASQ GVSPGSTAVQ
510 520 530 540 550
PTPAGYAPSS ATAYSQTSTS VGGGGGVGGS TYPSTYANVF GSTAGDQSQQ
560 570 580 590 600
QTQVRRARVK LPPPSKIPAT AVEMPGDNAL NNIGYLDVQF GALDFGTDDS
610 620 630 640 650
FDSMPEKFNA SVEQQQQQQD DYQSKSQQQQ QSTLTAGLQS SQIGDALSAA
660 670 680 690 700
GYAARSTAQQ QQQSASSTVA SNALDQLTKN DPYGQASSAS SAYQNAYQSS
710 720 730 740 750
AASKANSAYQ TSAQGSYSSS SYANVQSSVA NSYQQQGYGS YQPNVNSYQQ
760 770 780 790 800
QQTVAGTQPS VGGVVPGSGS ASTQNIPVGG SASQNSSSGN ASSAYLTSGY
810 820 830 840 850
STPQSAYQSS QSVYGNSSGF AGSASNASSQ YASFGTSAKL KDASTASGAA
860 870 880 890 900
HYDSVSTSSG VSSSSGSTGN GAAGAVSGQP GVNQASVSNN NNVSGSSSNS
910 920 930 940 950
NVTAGVTSGN VAGGGVSQSG VSSGGVGVAG GSGSASSVGV NVNNNNAGSV
960 970 980 990 1000
GGAAVAAQTA AGTAAVLASL TNKNSSSSNS SGSGVGGGAT TAGGVGGAST
1010 1020 1030 1040 1050
GSGVGAGSGA GSGGGGGSGS GLVPTNIQMV SQYIQTGLPY YQQPVYSYEE
1060 1070 1080 1090 1100
LQMMQQRVPH VQGYYDLNYT PTSLGAGRDN LGSVAYSTMT DGRFARTDNN
1110 1120 1130 1140 1150
SSPVSNVSST MSQQAGSSAP MLNVPYAYFY GGNVMPGGFQ YGTPAIYPQQ
1160 1170 1180 1190 1200
IPTANTASGG QFPKPSYSAG YGSTNYDTLS QTTQDYSKGG YSTSVNQQTK
1210 1220 1230 1240 1250
TQTVSNQPQA GTASDLTSSM YGKGHVALNK VNSYEKQSFH SGTPPPFNMA
1260 1270 1280 1290 1300
NTQTAGGTSA QPYGMYLPMP AAGHHNMIHQ PIHQMDGRIH SSSRRDSNSA
1310 1320
GQRQQSSSQS KSAGKQGYSP SYWTGQN
Length:1,327
Mass (Da):133,811
Last modified:January 20, 2009 - v3
Checksum:i3C3D3C6B39E74FC5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000071 Genomic DNA. Translation: EAL25239.2.
RefSeqiXP_001360664.3. XM_001360627.3.

Genome annotation databases

EnsemblMetazoaiFBtr0279248; FBpp0277686; FBgn0081265.
GeneIDi4804036.
KEGGidpo:Dpse_GA21277.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM000071 Genomic DNA. Translation: EAL25239.2.
RefSeqiXP_001360664.3. XM_001360627.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiFBtr0279248; FBpp0277686; FBgn0081265.
GeneIDi4804036.
KEGGidpo:Dpse_GA21277.

Organism-specific databases

FlyBaseiFBgn0081265. Dpse\GA21277.

Phylogenomic databases

InParanoidiQ290X3.
OMAiPGTIMNG.
OrthoDBiEOG761BTB.

Miscellaneous databases

ChiTaRSilig. fly.

Family and domain databases

InterProiIPR022166. DUF3697_Uba2.
IPR009060. UBA-like.
[Graphical view]
PfamiPF12478. DUF3697. 1 hit.
[Graphical view]
SUPFAMiSSF46934. SSF46934. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution."
    Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L.
    , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A.
    Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: MV2-25 / Tucson 14011-0121.94.

Entry informationi

Entry nameiLIG_DROPS
AccessioniPrimary (citable) accession number: Q290X3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 20, 2009
Last modified: March 16, 2016
This is version 43 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programDrosophila annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Drosophila
    Drosophila: entries, gene names and cross-references to FlyBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.