Q290F1 (Q290F1_DROPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GA19868 EMBL EAL25411.1

Gene names

Name:	GA19868 FlyBase FBgn0079864
Synonyms:	Dpse\GA19868 EMBL EAL25411.1
ORF Names:	Dpse_GA19868 EMBL EAL25411.1

Organism

Drosophila pseudoobscura pseudoobscura (Fruit fly)

Taxonomic identifier

46245 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Arthropoda › Hexapoda › Insecta › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Ephydroidea › Drosophilidae › Drosophila › Sophophora

Protein attributes

Sequence length	460 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q290F1 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 3475569C7E4CA07B	FASTA	460	52,177
	10 20 30 40 50 60 MLLIRRFYCS SQRISHIAKS NKRGDSLGIR GWIKNIRRLK NNTFLDIDDG SSSSRFQVVV 70 80 90 100 110 120 PRNPETQNLT PGSVISAVGE IQVAPNGNFE LHADRVESLA EGHLQDGYPF TPKQKHAPEY 130 140 150 160 170 180 VREHLHLRSR VDYVAAQMRI RHKAQKAIHD YMDELDFVQI NTPLMTTNDC EGAGEVFRVQ 190 200 210 220 230 240 PDSEELLKQM ARPNVPAEQS YFDSKVFLSV SGQLHLEAMT YGLGNTYCLA PAFRAENSKS 250 260 270 280 290 300 PLHLAEFYMF EAELAHLDEL EKLAKFIEQM LKSITNRVLE TSSEDLHFCQ RNANASSDLP 310 320 330 340 350 360 WLTVPWTIMS YDDALHVLQA NKESLKTPIS LDEGFTKDQE LFLVSHCGTP VFVVDWPTQQ 370 380 390 400 410 420 KPFYMKITRN NPDRVHALDL LMPAVGELCG GSLRESDAAT LSSHPQFPKD LSWYVDLRKY 430 440 450 460 GGIPTGGFGM GFERYLQLVT GVKNIRDVIP FPRYPHSCKM

References

[1]

"Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution." Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L. , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A. Genome Res. 15:1-18(2005) [PubMed: 15632085] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MV2-25 / Tucson 14011-0121.94.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000071 Genomic DNA. Translation: EAL25411.1.
RefSeq	XP_001360836.1. XM_001360799.2.
3D structure databases
ProteinModelPortal	Q290F1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	4804248.
GenomeReviews	Gene locus GA19868 in contig CM000071_GR.
KEGG	dpo:Dpse_GA19868.
Organism-specific databases
FlyBase	FBgn0079864. Dpse\GA19868.
Phylogenomic databases
InParanoid	Q290F1.
OMA	AIHRFFH.
OrthoDB	EOG47SQW4.
PhylomeDB	Q290F1.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01893.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q290F1_DROPS

Accession

Primary (citable) accession number: Q290F1

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	November 16, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)