Q28XZ6 (Q28XZ6_DROPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
GA17730 EMBL EAL26170.1

Gene names

Name:	Dpse\GA17730 EMBL EAL26170.1
ORF Names:	Dpse_GA17730 EMBL EAL26170.1, GA17730 FlyBase FBgn0077740

Organism

Drosophila pseudoobscura pseudoobscura (Fruit fly) [Reference proteome] EMBL EAL26170.1

Taxonomic identifier

46245 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Panarthropoda › Arthropoda › Mandibulata › Pancrustacea › Hexapoda › Insecta › Dicondylia › Pterygota › Neoptera › Endopterygota › Diptera › Brachycera › Muscomorpha › Eremoneura › Cyclorrhapha › Schizophora › Acalyptratae › Ephydroidea › Drosophilidae › Drosophilinae › Drosophilini › Drosophilina › Drosophiliti › Drosophila › Sophophora › obscura group › pseudoobscura subgroup › Drosophila pseudoobscura

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q28XZ6 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: A97561FD506ABB44	FASTA	382	43,819
	10 20 30 40 50 60 MDIVVQKSIF NSGRIGEIYE PPAGYYTPYN TPPYIAPYSD HGSLLAEQQM QQHIRFPTPP 70 80 90 100 110 120 VTPPRPAPGL LDFHAEDQYH HTQRTYSVIM KVHSQGDLCR SPVEFQDESK SCSSSSECGA 130 140 150 160 170 180 GSDFICNWLE CERVFETLEA LAQHVTQRHA IASLTDGLYY CRWAGCQRSE RGFNARYKML 190 200 210 220 230 240 VHTRTHTKEK PHSCHLCEKS FSRAENLKIH IRSHSGEKPY KCSFEGCQKA YSNSSDRFKH 250 260 270 280 290 300 TRTHSMEKPY MCKVAGCQKR YTDPSSLRKH VKTFKHSIHL IASQPLTLPL QTRAPYLLEA 310 320 330 340 350 360 SEAPAPYTCL PAGSVESSSS STRYYLDVSS NEPSDYSLKH KPETEYSSSY WLNERQHTYL 370 380 QSEDYYMSME VDSPLDLRMH RI

References

[1]

"Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution." Richards S., Liu Y., Bettencourt B.R., Hradecky P., Letovsky S., Nielsen R., Thornton K., Hubisz M.J., Chen R., Meisel R.P., Couronne O., Hua S., Smith M.A., Zhang P., Liu J., Bussemaker H.J., van Batenburg M.F., Howells S.L. , Scherer S.E., Sodergren E., Matthews B.B., Crosby M.A., Schroeder A.J., Ortiz-Barrientos D., Rives C.M., Metzker M.L., Muzny D.M., Scott G., Steffen D., Wheeler D.A., Worley K.C., Havlak P., Durbin K.J., Egan A., Gill R., Hume J., Morgan M.B., Miner G., Hamilton C., Huang Y., Waldron L., Verduzco D., Clerc-Blankenburg K.P., Dubchak I., Noor M.A.F., Anderson W., White K.P., Clark A.G., Schaeffer S.W., Gelbart W.M., Weinstock G.M., Gibbs R.A. Genome Res. 15:1-18(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MV2-25 / Tucson 14011-0121.94.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM000071 Genomic DNA. Translation: EAL26170.1.
RefSeq	XP_001361591.1. XM_001361554.2.
3D structure databases
ProteinModelPortal	Q28XZ6.
SMR	Q28XZ6. Positions 127-274.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	FBtr0279990; FBpp0278428; FBgn0077740.
GeneID	4805139.
KEGG	dpo:Dpse_GA17730.
Organism-specific databases
FlyBase	FBgn0077740. Dpse\GA17730.
Phylogenomic databases
InParanoid	Q28XZ6.
KO	K09233.
OMA	TRTHSME.
OrthoDB	EOG408KQ7.
Family and domain databases
Gene3D	3.30.160.60. 4 hits.
InterPro	IPR007087. Znf_C2H2. IPR015880. Znf_C2H2-like. IPR013087. Znf_C2H2/integrase_DNA-bd. [Graphical view]
SMART	SM00355. ZnF_C2H2. 5 hits. [Graphical view]
PROSITE	PS00028. ZINC_FINGER_C2H2_1. 4 hits. PS50157. ZINC_FINGER_C2H2_2. 5 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q28XZ6_DROPS

Accession

Primary (citable) accession number: Q28XZ6

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	May 29, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)