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Protein
Submitted name:

Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein

Gene

Jann_0254

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei30 – 301FMNCombined sources
Binding sitei83 – 831FMNCombined sources

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi44 – 474FMNCombined sources
Nucleotide bindingi61 – 622FMNCombined sources
Nucleotide bindingi67 – 682FMNCombined sources
Nucleotide bindingi90 – 923FMNCombined sources

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

Flavoprotein, FMNCombined sources, Nucleotide-bindingCombined sources

Enzyme and pathway databases

BioCyciJSP290400:GI1R-256-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxamine 5'-phosphate oxidase-related FMN-binding proteinImported
Gene namesi
Ordered Locus Names:Jann_0254Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
Proteomesi
  • UP000008326 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_0254.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OU5X-ray1.60A/B1-174[»]
ProteinModelPortaliQ28VU1.
SMRiQ28VU1. Positions 1-174.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ28VU1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini14 – 9986Pyridox_oxase_2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105Q4V. Bacteria.
ENOG4111Y9Z. LUCA.
HOGENOMiHOG000132671.
OrthoDBiPOG091H02VI.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR024624. Pyridox_Oxase_Alr4036_FMN-bd.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF12766. Pyridox_oxase_2. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.

Sequencei

Sequence statusi: Complete.

Q28VU1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDTVLTGLL DTVWQQFGRG TKDRHHPARH PTLATIGTDG PDLRTLVLRA
60 70 80 90 100
ASHAEATLEF HTDAASPKVA HIRRDARVAI HIWIPKASLQ VRAKAIAKIL
110 120 130 140 150
PGDPNLFAQL PEAARMNYQG PVPGTPLPAE PDATPNRFTR LICHLSEIDV
160 170
LHLTTPHQRA VYTAPDWRGI WVSP
Length:174
Mass (Da):19,180
Last modified:April 4, 2006 - v1
Checksum:i7404BD5F54DA8F24
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD53171.1.

Genome annotation databases

EnsemblBacteriaiABD53171; ABD53171; Jann_0254.
KEGGijan:Jann_0254.
PATRICi22144098. VBIJanSp43325_0326.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD53171.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2OU5X-ray1.60A/B1-174[»]
ProteinModelPortaliQ28VU1.
SMRiQ28VU1. Positions 1-174.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_0254.

Protocols and materials databases

DNASUi3932692.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD53171; ABD53171; Jann_0254.
KEGGijan:Jann_0254.
PATRICi22144098. VBIJanSp43325_0326.

Phylogenomic databases

eggNOGiENOG4105Q4V. Bacteria.
ENOG4111Y9Z. LUCA.
HOGENOMiHOG000132671.
OrthoDBiPOG091H02VI.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-256-MONOMER.

Miscellaneous databases

EvolutionaryTraceiQ28VU1.

Family and domain databases

Gene3Di2.30.110.10. 1 hit.
InterProiIPR024624. Pyridox_Oxase_Alr4036_FMN-bd.
IPR012349. Split_barrel_FMN-bd.
[Graphical view]
PfamiPF12766. Pyridox_oxase_2. 1 hit.
[Graphical view]
SUPFAMiSSF50475. SSF50475. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ28VU1_JANSC
AccessioniPrimary (citable) accession number: Q28VU1
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: September 7, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.