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Protein

Protein TolB

Gene

tolB

Organism
Jannaschia sp. (strain CCS1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the TonB-independent uptake of proteins.UniRule annotation

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

BioCyciJSP290400:GI1R-983-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein TolBUniRule annotation
Gene namesi
Name:tolBUniRule annotation
Ordered Locus Names:Jann_0975
OrganismiJannaschia sp. (strain CCS1)
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
Proteomesi
  • UP000008326 Componenti: Chromosome

Subcellular locationi

  • Periplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626UniRule annotationAdd
BLAST
Chaini27 – 445419Protein TolBPRO_0000259054Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_0975.

Structurei

3D structure databases

ProteinModelPortaliQ28TS0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the TolB family.UniRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4107R6Y. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000004097.
KOiK03641.
OMAiVREPSWG.
OrthoDBiPOG091H04CX.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR006311. TAT_signal.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 5 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q28TS0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNRRNFIRT TSALAASTAL PGYAFGQSGP LRLEITEGVI EPLPFALPTF
60 70 80 90 100
LAVGGAEDAA ADVSRVIAAD LRGTGLFRQI PPDAYISQIT NFGAPVAYPD
110 120 130 140 150
WQAINAQALI TGQVEARADG QLVVRFRLFD VFSQAPLGEG LQFVGPADSW
160 170 180 190 200
RRMAHTVADQ VYSRITGEGG YFDTRVAFIA EEGPKNARLK RLAIMDYDGA
210 220 230 240 250
NVQFLTDSRS IVLAPRFSPQ GDRILYTSYE SGFPQVYIMD VATVQRRPLE
260 270 280 290 300
AIPAETMTFS PRFSPSGQSV VFSLVDGSNT DIYSLDLATG TRRQLTQAPS
310 320 330 340 350
IETAPSFSPD GSQIVFESDR SGNQQIYIMP ADGGEARRVS AGTGRYGTPV
360 370 380 390 400
WSPRGDYIAF TKQENGRFHI GVMRTDGSDE RLLTSSFLDE GPTWAPNGRV
410 420 430 440
IMFTRETPGD DGAPAVYSVD ISGRNLQRVA TPGMASDPAW SPLQS
Length:445
Mass (Da):48,275
Last modified:April 4, 2006 - v1
Checksum:iCA5FB323072909B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD53892.1.
RefSeqiWP_011454100.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD53892; ABD53892; Jann_0975.
KEGGijan:Jann_0975.
PATRICi22145618. VBIJanSp43325_1081.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD53892.1.
RefSeqiWP_011454100.1. NC_007802.1.

3D structure databases

ProteinModelPortaliQ28TS0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_0975.

Protocols and materials databases

DNASUi3933419.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD53892; ABD53892; Jann_0975.
KEGGijan:Jann_0975.
PATRICi22145618. VBIJanSp43325_1081.

Phylogenomic databases

eggNOGiENOG4107R6Y. Bacteria.
COG0823. LUCA.
HOGENOMiHOG000004097.
KOiK03641.
OMAiVREPSWG.
OrthoDBiPOG091H04CX.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-983-MONOMER.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
3.40.50.10070. 1 hit.
HAMAPiMF_00671. TolB. 1 hit.
InterProiIPR011659. PD40.
IPR006311. TAT_signal.
IPR014167. Tol-Pal_propeller_TolB.
IPR007195. TolB_N.
IPR015943. WD40/YVTN_repeat-like_dom.
[Graphical view]
PfamiPF07676. PD40. 5 hits.
PF04052. TolB_N. 1 hit.
[Graphical view]
SUPFAMiSSF52964. SSF52964. 1 hit.
TIGRFAMsiTIGR02800. propeller_TolB. 1 hit.
PROSITEiPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTOLB_JANSC
AccessioniPrimary (citable) accession number: Q28TS0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: April 4, 2006
Last modified: September 7, 2016
This is version 64 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.