Q28SL6 (Q28SL6_JANSC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor EMBL ABD54296.1

Gene names

Ordered Locus Names:

Jann_1379 EMBL ABD54296.1

Organism

Jannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD54296.1

Taxonomic identifier

290400 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Jannaschia

Protein attributes

Sequence length	452 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	chemotaxis Inferred from electronic annotation. Source: InterPro regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro signal transduction by phosphorylation Inferred from electronic annotation. Source: GOC
Cellular_component	integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay sensor kinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q28SL6 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 75B3518E62418FD7	FASTA	452	47,749
	10 20 30 40 50 60 MFWKAKHPVE PSKVDDVTET FIAIIDRTQA TIQFELDGTI IDANANLLRA TGYTLDELVG 70 80 90 100 110 120 KHHSMFVDPG FAKTPAYAQF WERLGQGEIL DDIYPRIAKD GSTVWMQAAY APVFAADGTP 130 140 150 160 170 180 TRVIKIATDI TDRQSDIAEI AVGLEEMSNK TLSHRIAVSK HNDLAKLGTA FNLAQEQLSS 190 200 210 220 230 240 ALDIAKDVSS GVEQTADDLS QASGALAQRT ETQAATLEET AAALEEMSAT VQATVGSTKD 250 260 270 280 290 300 VERAAKAATA TAETGGKVVD NAVNAMSLIE KSSHDIARII SVMEEIAFQT NLLALNAGVE 310 320 330 340 350 360 AARAGDAGRG FAVVASEVRA LAQRASESAG EIKTLISGSS EHVASGVELV GRAGKELSNI 370 380 390 400 410 420 ISSVSQISSN ISDIANTTTE QATALTEINT GLSQLDQVTQ QNTAMVAETS AAGQTLAKDA 430 440 450 KHLTEVLSDF QTHIDGYAAP QISMDSPERL SA

References

[1]

"Complete sequence of chromosome of Jannaschia sp. CCS1." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCS1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000264 Genomic DNA. Translation: ABD54296.1.
RefSeq	YP_509321.1. NC_007802.1.
3D structure databases
ProteinModelPortal	Q28SL6.
ModBase	Search...
Protein-protein interaction databases
STRING	290400.Jann_1379.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABD54296; ABD54296; Jann_1379.
GeneID	3933826.
KEGG	jan:Jann_1379.
PATRIC	22146460. VBIJanSp43325_1501.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0840.
HOGENOM	HOG000148075.
KO	K03406.
OMA	MADAINV.
ProtClustDB	CLSK753909.
Enzyme and pathway databases
BioCyc	JSP290400:GI1R-1432-MONOMER.
Family and domain databases
InterPro	IPR004090. Chemotax_Me-accpt_rcpt. IPR003660. HAMP_linker_domain. IPR004089. MCPsignal_dom. IPR001610. PAC. IPR000014. PAS. IPR000700. PAS-assoc_C. [Graphical view]
Pfam	PF00015. MCPsignal. 1 hit. [Graphical view]
PRINTS	PR00260. CHEMTRNSDUCR.
SMART	SM00304. HAMP. 1 hit. SM00283. MA. 1 hit. SM00086. PAC. 1 hit. SM00091. PAS. 1 hit. [Graphical view]
TIGRFAMs	TIGR00229. sensory_box. 1 hit.
PROSITE	PS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit. PS50885. HAMP. 1 hit. PS50113. PAC. 1 hit. PS50112. PAS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q28SL6_JANSC

Accession

Primary (citable) accession number: Q28SL6

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)