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Q28SL6 (Q28SL6_JANSC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 56. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Jann_1379 EMBL ABD54296.1
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD54296.1
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length452 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionphosphorelay sensor kinase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q28SL6 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 75B3518E62418FD7

FASTA45247,749
        10         20         30         40         50         60 
MFWKAKHPVE PSKVDDVTET FIAIIDRTQA TIQFELDGTI IDANANLLRA TGYTLDELVG 

        70         80         90        100        110        120 
KHHSMFVDPG FAKTPAYAQF WERLGQGEIL DDIYPRIAKD GSTVWMQAAY APVFAADGTP 

       130        140        150        160        170        180 
TRVIKIATDI TDRQSDIAEI AVGLEEMSNK TLSHRIAVSK HNDLAKLGTA FNLAQEQLSS 

       190        200        210        220        230        240 
ALDIAKDVSS GVEQTADDLS QASGALAQRT ETQAATLEET AAALEEMSAT VQATVGSTKD 

       250        260        270        280        290        300 
VERAAKAATA TAETGGKVVD NAVNAMSLIE KSSHDIARII SVMEEIAFQT NLLALNAGVE 

       310        320        330        340        350        360 
AARAGDAGRG FAVVASEVRA LAQRASESAG EIKTLISGSS EHVASGVELV GRAGKELSNI 

       370        380        390        400        410        420 
ISSVSQISSN ISDIANTTTE QATALTEINT GLSQLDQVTQ QNTAMVAETS AAGQTLAKDA 

       430        440        450 
KHLTEVLSDF QTHIDGYAAP QISMDSPERL SA 

« Hide

References

[1]"Complete sequence of chromosome of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000264 Genomic DNA. Translation: ABD54296.1.
RefSeqYP_509321.1. NC_007802.1.

3D structure databases

ProteinModelPortalQ28SL6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_1379.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD54296; ABD54296; Jann_1379.
GeneID3933826.
KEGGjan:Jann_1379.
PATRIC22146460. VBIJanSp43325_1501.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
HOGENOMHOG000148075.
KOK03406.
OMAKATESIG.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycJSP290400:GI1R-1390-MONOMER.

Family and domain databases

InterProIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMSSF55785. SSF55785. 1 hit.
TIGRFAMsTIGR00229. sensory_box. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ28SL6_JANSC
AccessionPrimary (citable) accession number: Q28SL6
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 14, 2014
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)