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Protein
Submitted name:

Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Gene

Jann_1379

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciJSP290400:GI1R-1390-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensorImported
Gene namesi
Ordered Locus Names:Jann_1379Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
ProteomesiUP000008326 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_1379.

Structurei

3D structure databases

ProteinModelPortaliQ28SL6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148075.
KOiK03406.
OMAiFQAREFR.
OrthoDBiEOG6G4VQG.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28SL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFWKAKHPVE PSKVDDVTET FIAIIDRTQA TIQFELDGTI IDANANLLRA
60 70 80 90 100
TGYTLDELVG KHHSMFVDPG FAKTPAYAQF WERLGQGEIL DDIYPRIAKD
110 120 130 140 150
GSTVWMQAAY APVFAADGTP TRVIKIATDI TDRQSDIAEI AVGLEEMSNK
160 170 180 190 200
TLSHRIAVSK HNDLAKLGTA FNLAQEQLSS ALDIAKDVSS GVEQTADDLS
210 220 230 240 250
QASGALAQRT ETQAATLEET AAALEEMSAT VQATVGSTKD VERAAKAATA
260 270 280 290 300
TAETGGKVVD NAVNAMSLIE KSSHDIARII SVMEEIAFQT NLLALNAGVE
310 320 330 340 350
AARAGDAGRG FAVVASEVRA LAQRASESAG EIKTLISGSS EHVASGVELV
360 370 380 390 400
GRAGKELSNI ISSVSQISSN ISDIANTTTE QATALTEINT GLSQLDQVTQ
410 420 430 440 450
QNTAMVAETS AAGQTLAKDA KHLTEVLSDF QTHIDGYAAP QISMDSPERL

SA
Length:452
Mass (Da):47,749
Last modified:April 4, 2006 - v1
Checksum:i75B3518E62418FD7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD54296.1.

Genome annotation databases

EnsemblBacteriaiABD54296; ABD54296; Jann_1379.
KEGGijan:Jann_1379.
PATRICi22146460. VBIJanSp43325_1501.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD54296.1.

3D structure databases

ProteinModelPortaliQ28SL6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_1379.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD54296; ABD54296; Jann_1379.
KEGGijan:Jann_1379.
PATRICi22146460. VBIJanSp43325_1501.

Phylogenomic databases

eggNOGiCOG0840.
HOGENOMiHOG000148075.
KOiK03406.
OMAiFQAREFR.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-1390-MONOMER.

Family and domain databases

InterProiIPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR001610. PAC.
IPR000014. PAS.
IPR000700. PAS-assoc_C.
[Graphical view]
PfamiPF00015. MCPsignal. 1 hit.
PF13426. PAS_9. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
SM00086. PAC. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00229. sensory_box. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50113. PAC. 1 hit.
PS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCS1Imported.

Entry informationi

Entry nameiQ28SL6_JANSC
AccessioniPrimary (citable) accession number: Q28SL6
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: July 22, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.