Q28R12 (Q28R12_JANSC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
5-aminolevulinate synthase EMBL ABD54850.1
EC=2.3.1.37 EMBL ABD54850.1

Gene names

Ordered Locus Names:

Jann_1933

Organism

Jannaschia sp. (strain CCS1) [Complete proteome] [HAMAP]

Taxonomic identifier

290400 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Jannaschia

Protein attributes

Sequence length	434 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU003693
Sequence similarities	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003693

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003693
Molecular function	Acyltransferase EMBL ABD54850.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tetrapyrrole biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	5-aminolevulinate synthase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring nitrogenous groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q28R12 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 147E5596105DB6AA	FASTA	434	46,837
	10 20 30 40 50 60 MSGLRRESPA HSHRTEGVEQ PPTGRPPVNY DTALDAAIGK LHEEGRYRTF IDIERRRGQF 70 80 90 100 110 120 PHAVWTRPDG TEQDITVWCG NDYLGMGQHP VVLDAMKEAL DATGAGSGGT RNISGTTVYH 130 140 150 160 170 180 KALEAELCDL HGKEGALLFT SAYIANDATL STLPKLFPGL IIYSDALNHA SMIEGVRRNG 190 200 210 220 230 240 GAKRIFRHND VAHLRELLQA DDPTAPKLIA FESIYSMDGD FGPIEALCDL ADEFGALTYL 250 260 270 280 290 300 DEVHAVGMYG PRGGGVAERD GLMDRVDIIN GTLGKAYGVH GGYIAASARM CDAVRSYAPG 310 320 330 340 350 360 FIFTTSLPPA VAAGAAASVR HLKTDQALRD LHQDRAAVLK LRLKGMGLPI IDHGSHIVPV 370 380 390 400 410 420 MVGNPVHTKA ISDALLADFG IYVQPINYPT VPRGTERLRF TPSPVHDTGM IDGLVHAMDG 430 LWSHCALNRQ ELAG

References

[1]

"Complete sequence of chromosome of Jannaschia sp. CCS1." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P. Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CCS1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000264 Genomic DNA. Translation: ABD54850.1.
RefSeq	YP_509875.1. NC_007802.1.
3D structure databases
ProteinModelPortal	Q28R12.
SMR	Q28R12. Positions 28-422.
ModBase	Search...
Protein-protein interaction databases
STRING	Q28R12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3934384.
GenomeReviews	Gene locus Jann_1933 in contig CP000264_GR.
KEGG	jan:Jann_1933.
PATRIC	22147610. VBIJanSp43325_2072.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0156.
HOGENOM	HBG649839.
OMA	NARCFAG.
PhylomeDB	Q28R12.
ProtClustDB	PRK09064.
Family and domain databases
InterPro	IPR010961. 4pyrrol_synth_NH2levulA_synth. IPR001917. Aminotrans_II_pyridoxalP_BS. IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit. G3DSA:3.90.1150.10. PyrdxlP-dep_Trfase_major_sub2. 1 hit.
KO	K00643.
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01821. 5aminolev_synth. 1 hit.
PROSITE	PS00599. AA_TRANSFER_CLASS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q28R12_JANSC

Accession

Primary (citable) accession number: Q28R12

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	December 14, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)