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Q28QI7

- Q28QI7_JANSC

UniProt

Q28QI7 - Q28QI7_JANSC

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Protein

Xylose isomerase

Gene

Jann_2108

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. xylose isomerase activity Source: UniProtKB-EC

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-KW
  2. pentose-phosphate shunt Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciJSP290400:GI1R-2125-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Ordered Locus Names:Jann_2108Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
ProteomesiUP000008326: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi290400.Jann_2108.

Structurei

3D structure databases

ProteinModelPortaliQ28QI7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG4952.
HOGENOMiHOG000224339.
KOiK01805.
OMAiLMVGSVH.
OrthoDBiEOG651SS4.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28QI7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSRPNRPRYA ARLNAFKQLT PGSDVRDWIA AAGQVGGLGA ADLNFPDHFA
60 70 80 90 100
VYDADQMGNF LGEAALTLNG IAMRYYTDPG FKLGAFTHPD AAVRQAALDV
110 120 130 140 150
TKQGIDTCAR MGGKTVTLWM GQDGFDYAFQ MDYGLAWDRT VAAIADICAH
160 170 180 190 200
DPNIDIAIEY KPNEPRAFAL MPDIGTTLLA CREVGAVNLG VTLDFAHVLY
210 220 230 240 250
ADEMPAHSAA LIGRHSRMIG LHLNDGYGKR DDGLMVGSVH AIQTVELLVA
260 270 280 290 300
MLRMGQTDVI YFDTFPDMGG LNPIEEARTN VAVTDRLMAV AESLMEDPAL
310 320
AQAIDRQDAA ASHRIVARAL YGS
Length:323
Mass (Da):34,938
Last modified:April 4, 2006 - v1
Checksum:i87F69DFE24C2BEF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55025.1.
RefSeqiWP_011455229.1. NC_007802.1.
YP_510050.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD55025; ABD55025; Jann_2108.
GeneIDi3934561.
KEGGijan:Jann_2108.
PATRICi22147966. VBIJanSp43325_2248.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55025.1 .
RefSeqi WP_011455229.1. NC_007802.1.
YP_510050.1. NC_007802.1.

3D structure databases

ProteinModelPortali Q28QI7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 290400.Jann_2108.

Protocols and materials databases

DNASUi 3934561.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD55025 ; ABD55025 ; Jann_2108 .
GeneIDi 3934561.
KEGGi jan:Jann_2108.
PATRICi 22147966. VBIJanSp43325_2248.

Phylogenomic databases

eggNOGi COG4952.
HOGENOMi HOG000224339.
KOi K01805.
OMAi LMVGSVH.
OrthoDBi EOG651SS4.

Enzyme and pathway databases

BioCyci JSP290400:GI1R-2125-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
SUPFAMi SSF51658. SSF51658. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCS1Imported.

Entry informationi

Entry nameiQ28QI7_JANSC
AccessioniPrimary (citable) accession number: Q28QI7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: October 29, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3