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Q28QI7

- Q28QI7_JANSC

UniProt

Q28QI7 - Q28QI7_JANSC

Protein

Xylose isomerase

Gene

Jann_2108

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 53 (01 Oct 2014)
      Sequence version 1 (04 Apr 2006)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.SAAS annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. xylose isomerase activity Source: UniProtKB-EC

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-KW
    2. pentose-phosphate shunt Source: UniProtKB-KW

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciJSP290400:GI1R-2125-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Ordered Locus Names:Jann_2108Imported
    OrganismiJannaschia sp. (strain CCS1)Imported
    Taxonomic identifieri290400 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
    ProteomesiUP000008326: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi290400.Jann_2108.

    Structurei

    3D structure databases

    ProteinModelPortaliQ28QI7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.

    Phylogenomic databases

    eggNOGiCOG4952.
    HOGENOMiHOG000224339.
    KOiK01805.
    OMAiLMVGSVH.
    OrthoDBiEOG651SS4.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF51658. SSF51658. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q28QI7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSRPNRPRYA ARLNAFKQLT PGSDVRDWIA AAGQVGGLGA ADLNFPDHFA    50
    VYDADQMGNF LGEAALTLNG IAMRYYTDPG FKLGAFTHPD AAVRQAALDV 100
    TKQGIDTCAR MGGKTVTLWM GQDGFDYAFQ MDYGLAWDRT VAAIADICAH 150
    DPNIDIAIEY KPNEPRAFAL MPDIGTTLLA CREVGAVNLG VTLDFAHVLY 200
    ADEMPAHSAA LIGRHSRMIG LHLNDGYGKR DDGLMVGSVH AIQTVELLVA 250
    MLRMGQTDVI YFDTFPDMGG LNPIEEARTN VAVTDRLMAV AESLMEDPAL 300
    AQAIDRQDAA ASHRIVARAL YGS 323
    Length:323
    Mass (Da):34,938
    Last modified:April 4, 2006 - v1
    Checksum:i87F69DFE24C2BEF6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000264 Genomic DNA. Translation: ABD55025.1.
    RefSeqiWP_011455229.1. NC_007802.1.
    YP_510050.1. NC_007802.1.

    Genome annotation databases

    EnsemblBacteriaiABD55025; ABD55025; Jann_2108.
    GeneIDi3934561.
    KEGGijan:Jann_2108.
    PATRICi22147966. VBIJanSp43325_2248.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000264 Genomic DNA. Translation: ABD55025.1 .
    RefSeqi WP_011455229.1. NC_007802.1.
    YP_510050.1. NC_007802.1.

    3D structure databases

    ProteinModelPortali Q28QI7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 290400.Jann_2108.

    Protocols and materials databases

    DNASUi 3934561.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD55025 ; ABD55025 ; Jann_2108 .
    GeneIDi 3934561.
    KEGGi jan:Jann_2108.
    PATRICi 22147966. VBIJanSp43325_2248.

    Phylogenomic databases

    eggNOGi COG4952.
    HOGENOMi HOG000224339.
    KOi K01805.
    OMAi LMVGSVH.
    OrthoDBi EOG651SS4.

    Enzyme and pathway databases

    BioCyci JSP290400:GI1R-2125-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51658. SSF51658. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCS1Imported.

    Entry informationi

    Entry nameiQ28QI7_JANSC
    AccessioniPrimary (citable) accession number: Q28QI7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 4, 2006
    Last sequence update: April 4, 2006
    Last modified: October 1, 2014
    This is version 53 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3