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Q28QI7 (Q28QI7_JANSC) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 51. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Xylose isomerase RuleBase RU000609

EC=5.3.1.5 RuleBase RU000609
Gene names
Ordered Locus Names:Jann_2108 EMBL ABD55025.1
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD55025.1
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length323 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 SAAS SAAS001998

Subunit structure

Homotetramer By similarity. RuleBase RU000610

Subcellular location

Cytoplasm By similarity RuleBase RU000610.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609

Sequences

Sequence LengthMass (Da)Tools
Q28QI7 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 87F69DFE24C2BEF6

FASTA32334,938
        10         20         30         40         50         60 
MSRPNRPRYA ARLNAFKQLT PGSDVRDWIA AAGQVGGLGA ADLNFPDHFA VYDADQMGNF 

        70         80         90        100        110        120 
LGEAALTLNG IAMRYYTDPG FKLGAFTHPD AAVRQAALDV TKQGIDTCAR MGGKTVTLWM 

       130        140        150        160        170        180 
GQDGFDYAFQ MDYGLAWDRT VAAIADICAH DPNIDIAIEY KPNEPRAFAL MPDIGTTLLA 

       190        200        210        220        230        240 
CREVGAVNLG VTLDFAHVLY ADEMPAHSAA LIGRHSRMIG LHLNDGYGKR DDGLMVGSVH 

       250        260        270        280        290        300 
AIQTVELLVA MLRMGQTDVI YFDTFPDMGG LNPIEEARTN VAVTDRLMAV AESLMEDPAL 

       310        320 
AQAIDRQDAA ASHRIVARAL YGS 

« Hide

References

[1]"Complete sequence of chromosome of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000264 Genomic DNA. Translation: ABD55025.1.
RefSeqYP_510050.1. NC_007802.1.

3D structure databases

ProteinModelPortalQ28QI7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_2108.

Protocols and materials databases

DNASU3934561.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD55025; ABD55025; Jann_2108.
GeneID3934561.
KEGGjan:Jann_2108.
PATRIC22147966. VBIJanSp43325_2248.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4952.
HOGENOMHOG000224339.
KOK01805.
OMALMVGSVH.
OrthoDBEOG651SS4.

Enzyme and pathway databases

BioCycJSP290400:GI1R-2125-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMSSF51658. SSF51658. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ28QI7_JANSC
AccessionPrimary (citable) accession number: Q28QI7
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)