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Q28NX8

- Q28NX8_JANSC

UniProt

Q28NX8 - Q28NX8_JANSC

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Jann_2667

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (04 Apr 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciJSP290400:GI1R-2695-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Jann_2667Imported
    OrganismiJannaschia sp. (strain CCS1)Imported
    Taxonomic identifieri290400 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
    ProteomesiUP000008326: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi290400.Jann_2667.

    Structurei

    3D structure databases

    ProteinModelPortaliQ28NX8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q28NX8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFAALFTT LDQTTKTSVK TAALADYFRT APEDDRIWTI ALLSGRRPRR    50
    TITTTKLREW AAERAGIPLW LFEACYPVVG DLSETIALVL PEPETRIDKS 100
    LSAWIATLRG LDNAEEDARK AAILEAWNGL PPIERFVFNK LITGGWRMGV 150
    SQKLMTRALS KATDIDEAEL THRLMGDWSP DTVSWDGLIE APDPTTNLSR 200
    PYPFYLAYQL EGDAEDQGGV GDWVAERKWD GIRGQLIMRG GERYLWSRGE 250
    DLMTDRFPEF AQLLDYLPSG TVLDGEVLAY DFVNNTPLSF NKLQPRIGRK 300
    TVPKKLLAEA PCILMAYDLL EWQGADIRHR PLAERRALLE EATDNMPPDA 350
    PLRLSPRVEA ESWDDLRAAR AISRDIGAEG LMLKRLSAPY LAGRKKGDWW 400
    KWKVDPLTID AVMIYAQAGS GRRATLYTDF TFAVWNGPDL VPFTKAYSGL 450
    TDKEFREITA WVRKNTTDRF GPVRAVTPHH VFEIAFEGIQ PSPRHKSGVA 500
    LRFPRMLRWR KDKPLEEANT LDDLNQMLEQ YG 532
    Length:532
    Mass (Da):60,315
    Last modified:April 4, 2006 - v1
    Checksum:i66347680C532B84E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000264 Genomic DNA. Translation: ABD55584.1.
    RefSeqiWP_011455788.1. NC_007802.1.
    YP_510609.1. NC_007802.1.

    Genome annotation databases

    EnsemblBacteriaiABD55584; ABD55584; Jann_2667.
    GeneIDi3935131.
    KEGGijan:Jann_2667.
    PATRICi22149158. VBIJanSp43325_2835.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000264 Genomic DNA. Translation: ABD55584.1 .
    RefSeqi WP_011455788.1. NC_007802.1.
    YP_510609.1. NC_007802.1.

    3D structure databases

    ProteinModelPortali Q28NX8.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 290400.Jann_2667.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABD55584 ; ABD55584 ; Jann_2667 .
    GeneIDi 3935131.
    KEGGi jan:Jann_2667.
    PATRICi 22149158. VBIJanSp43325_2835.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci JSP290400:GI1R-2695-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CCS1Imported.

    Entry informationi

    Entry nameiQ28NX8_JANSC
    AccessioniPrimary (citable) accession number: Q28NX8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 4, 2006
    Last sequence update: April 4, 2006
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3