Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q28NX8

- Q28NX8_JANSC

UniProt

Q28NX8 - Q28NX8_JANSC

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Jann_2667

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciJSP290400:GI1R-2695-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Jann_2667Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
ProteomesiUP000008326: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_2667.

Structurei

3D structure databases

ProteinModelPortaliQ28NX8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28NX8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFAALFTT LDQTTKTSVK TAALADYFRT APEDDRIWTI ALLSGRRPRR
60 70 80 90 100
TITTTKLREW AAERAGIPLW LFEACYPVVG DLSETIALVL PEPETRIDKS
110 120 130 140 150
LSAWIATLRG LDNAEEDARK AAILEAWNGL PPIERFVFNK LITGGWRMGV
160 170 180 190 200
SQKLMTRALS KATDIDEAEL THRLMGDWSP DTVSWDGLIE APDPTTNLSR
210 220 230 240 250
PYPFYLAYQL EGDAEDQGGV GDWVAERKWD GIRGQLIMRG GERYLWSRGE
260 270 280 290 300
DLMTDRFPEF AQLLDYLPSG TVLDGEVLAY DFVNNTPLSF NKLQPRIGRK
310 320 330 340 350
TVPKKLLAEA PCILMAYDLL EWQGADIRHR PLAERRALLE EATDNMPPDA
360 370 380 390 400
PLRLSPRVEA ESWDDLRAAR AISRDIGAEG LMLKRLSAPY LAGRKKGDWW
410 420 430 440 450
KWKVDPLTID AVMIYAQAGS GRRATLYTDF TFAVWNGPDL VPFTKAYSGL
460 470 480 490 500
TDKEFREITA WVRKNTTDRF GPVRAVTPHH VFEIAFEGIQ PSPRHKSGVA
510 520 530
LRFPRMLRWR KDKPLEEANT LDDLNQMLEQ YG
Length:532
Mass (Da):60,315
Last modified:April 4, 2006 - v1
Checksum:i66347680C532B84E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000264 Genomic DNA. Translation: ABD55584.1.
RefSeqiWP_011455788.1. NC_007802.1.
YP_510609.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD55584; ABD55584; Jann_2667.
GeneIDi3935131.
KEGGijan:Jann_2667.
PATRICi22149158. VBIJanSp43325_2835.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000264 Genomic DNA. Translation: ABD55584.1 .
RefSeqi WP_011455788.1. NC_007802.1.
YP_510609.1. NC_007802.1.

3D structure databases

ProteinModelPortali Q28NX8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 290400.Jann_2667.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABD55584 ; ABD55584 ; Jann_2667 .
GeneIDi 3935131.
KEGGi jan:Jann_2667.
PATRICi 22149158. VBIJanSp43325_2835.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci JSP290400:GI1R-2695-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCS1Imported.

Entry informationi

Entry nameiQ28NX8_JANSC
AccessioniPrimary (citable) accession number: Q28NX8
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: October 1, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3