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Protein
Submitted name:

Binding-protein-dependent transport systems inner membrane component

Gene

Jann_3041

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3075-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Binding-protein-dependent transport systems inner membrane componentImported
Gene namesi
Ordered Locus Names:Jann_3041Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
Proteomesi
  • UP000008326 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei58 – 78HelicalUniRule annotationAdd BLAST21
Transmembranei150 – 179HelicalUniRule annotationAdd BLAST30
Transmembranei191 – 212HelicalUniRule annotationAdd BLAST22
Transmembranei224 – 249HelicalUniRule annotationAdd BLAST26
Transmembranei270 – 301HelicalUniRule annotationAdd BLAST32
Transmembranei321 – 339HelicalUniRule annotationAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_3041.

Structurei

3D structure databases

ProteinModelPortaliQ28MV4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 343ABC transmembrane type-1InterPro annotationAdd BLAST194

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation
Contains 1 ABC transmembrane type-1 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105DG7. Bacteria.
COG0600. LUCA.
HOGENOMiHOG000134232.
KOiK15577.
OMAiIPMIFTG.
OrthoDBiPOG091H06WP.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28MV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIADPNFDT EKEARRERVF TRINKADSWL RVLGLAWITP MLRIAAGDNP
60 70 80 90 100
RAQGGEIWRL LGVPLLAIAA FLTMWATLAP TVQTSLGAIP GPAQVWEQVG
110 120 130 140 150
NLNDDAIRTR ERAADFFERQ ETRNAERIAN GEEARPIRDF TGAPTYYQQI
160 170 180 190 200
WTSITTVFFG FLLATVVAVP LGIAAGLSAT ANAALNPIIQ IFKPVSPLAW
210 220 230 240 250
LPIVSIVVSA LAADDGLFEK SFMVSAITVT LCSLWPTLIN TALGVASIDK
260 270 280 290 300
DLVNVSKVLK MGTWTKIQKL VLPSALPLIF TGLRLSLGVG WMVLIAAEML
310 320 330 340 350
AQNPGLGKFV WDEFQNGSSQ SLAKIMVAVL TIGLIGFLLD RLMFTIQSLF

TFTNNR
Length:356
Mass (Da):38,872
Last modified:April 4, 2006 - v1
Checksum:iF6A2CAB4732A44D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55958.1.
RefSeqiWP_011456162.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD55958; ABD55958; Jann_3041.
KEGGijan:Jann_3041.
PATRICi22149936. VBIJanSp43325_3218.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55958.1.
RefSeqiWP_011456162.1. NC_007802.1.

3D structure databases

ProteinModelPortaliQ28MV4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_3041.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD55958; ABD55958; Jann_3041.
KEGGijan:Jann_3041.
PATRICi22149936. VBIJanSp43325_3218.

Phylogenomic databases

eggNOGiENOG4105DG7. Bacteria.
COG0600. LUCA.
HOGENOMiHOG000134232.
KOiK15577.
OMAiIPMIFTG.
OrthoDBiPOG091H06WP.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3075-MONOMER.

Family and domain databases

CDDicd06261. TM_PBP2. 1 hit.
Gene3Di1.10.3720.10. 1 hit.
InterProiIPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ28MV4_JANSC
AccessioniPrimary (citable) accession number: Q28MV4
Entry historyi
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: November 30, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.