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Protein
Submitted name:

Binding-protein-dependent transport systems inner membrane component

Gene

Jann_3041

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3075-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Binding-protein-dependent transport systems inner membrane componentImported
Gene namesi
Ordered Locus Names:Jann_3041Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
Proteomesi

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei58 – 78HelicalUniRule annotationAdd BLAST21
Transmembranei150 – 179HelicalUniRule annotationAdd BLAST30
Transmembranei191 – 212HelicalUniRule annotationAdd BLAST22
Transmembranei224 – 249HelicalUniRule annotationAdd BLAST26
Transmembranei270 – 301HelicalUniRule annotationAdd BLAST32
Transmembranei321 – 339HelicalUniRule annotationAdd BLAST19

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_3041

Structurei

3D structure databases

ProteinModelPortaliQ28MV4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini150 – 343ABC transmembrane type-1InterPro annotationAdd BLAST194

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105DG7 Bacteria
COG0600 LUCA
HOGENOMiHOG000134232
KOiK15577
OMAiLCCLWPT
OrthoDBiPOG091H06WP

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

Q28MV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIADPNFDT EKEARRERVF TRINKADSWL RVLGLAWITP MLRIAAGDNP
60 70 80 90 100
RAQGGEIWRL LGVPLLAIAA FLTMWATLAP TVQTSLGAIP GPAQVWEQVG
110 120 130 140 150
NLNDDAIRTR ERAADFFERQ ETRNAERIAN GEEARPIRDF TGAPTYYQQI
160 170 180 190 200
WTSITTVFFG FLLATVVAVP LGIAAGLSAT ANAALNPIIQ IFKPVSPLAW
210 220 230 240 250
LPIVSIVVSA LAADDGLFEK SFMVSAITVT LCSLWPTLIN TALGVASIDK
260 270 280 290 300
DLVNVSKVLK MGTWTKIQKL VLPSALPLIF TGLRLSLGVG WMVLIAAEML
310 320 330 340 350
AQNPGLGKFV WDEFQNGSSQ SLAKIMVAVL TIGLIGFLLD RLMFTIQSLF

TFTNNR
Length:356
Mass (Da):38,872
Last modified:April 4, 2006 - v1
Checksum:iF6A2CAB4732A44D1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA Translation: ABD55958.1
RefSeqiWP_011456162.1, NC_007802.1

Genome annotation databases

EnsemblBacteriaiABD55958; ABD55958; Jann_3041
KEGGijan:Jann_3041

Similar proteinsi

Entry informationi

Entry nameiQ28MV4_JANSC
AccessioniPrimary (citable) accession number: Q28MV4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: March 28, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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