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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

rbcL

Organism
Jannaschia sp. (strain CCS1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3098-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Name:rbcLImported
Ordered Locus Names:Jann_3063Imported
OrganismiJannaschia sp. (strain CCS1)Imported
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
ProteomesiUP000008326 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_3063.

Structurei

3D structure databases

ProteinModelPortaliQ28MT2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiPMYAINI.
OrthoDBiEOG62K1SK.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28MT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRFEADYLI ETPGDPQAAT ETMAGEQSSG TFVSVPGETA ELKERAAARV
60 70 80 90 100
ERLEDLGEVP APSLPTPGAA GAQRRARVTL SWPMDSIGAS LPNLMTTVGG
110 120 130 140 150
NLFELRAFSG LRVEDIRLPA AFAAAGPGPR FGPDGTRRLA GVEKGPLIGT
160 170 180 190 200
IVKPSVGLSP ENTAGLVAEM AEAGLDFIKD DELQADGPAC PFDARVRAVM
210 220 230 240 250
DVLNRHADRT GKKVMYAFNL TGEVDEMRRR HDLVRDLGGT CVMVSMLPVG
260 270 280 290 300
LSGFLALSRH ADLPIHAHRN GWGALSRHPA LGWSYVAFSK LWRLAGADHL
310 320 330 340 350
HVNGLSNKFC EPDESVTASA RACLSPLMEG HPMLAMPVFS SGQTAAQAAP
360 370 380 390
TLAALGSADL IHAAGGGILG HPDGPRAGVA AMRSAWAEAM HG
Length:392
Mass (Da):41,186
Last modified:April 3, 2006 - v1
Checksum:iCDD89FF0C24054C0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55980.1.
RefSeqiWP_011456184.1. NC_007802.1.
YP_511005.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD55980; ABD55980; Jann_3063.
GeneIDi3935534.
KEGGijan:Jann_3063.
PATRICi22149980. VBIJanSp43325_3240.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD55980.1.
RefSeqiWP_011456184.1. NC_007802.1.
YP_511005.1. NC_007802.1.

3D structure databases

ProteinModelPortaliQ28MT2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_3063.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD55980; ABD55980; Jann_3063.
GeneIDi3935534.
KEGGijan:Jann_3063.
PATRICi22149980. VBIJanSp43325_3240.

Phylogenomic databases

eggNOGiCOG1850.
HOGENOMiHOG000230831.
KOiK01601.
OMAiPMYAINI.
OrthoDBiEOG62K1SK.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3098-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCS1Imported.

Entry informationi

Entry nameiQ28MT2_JANSC
AccessioniPrimary (citable) accession number: Q28MT2
Entry historyi
Integrated into UniProtKB/TrEMBL: April 3, 2006
Last sequence update: April 3, 2006
Last modified: March 31, 2015
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.