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Q28MN0 (GLGA_JANSC) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Jann_3115
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP]
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length472 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 472472Glycogen synthase HAMAP-Rule MF_00484
PRO_0000241793

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
Q28MN0 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 3F1416B5EDC01398

FASTA47250,084
        10         20         30         40         50         60 
MTRVLSVASE CAPLVKTGGL ADVVGALPGA MAALGDELRT LVPGYATMPV VGGAVVAAFD 

        70         80         90        100        110        120 
DLFGGPATVD ALTHEGLDLL ILRAPHLFDR PGGLYIDAFG ADWPDNAERF AALSYAAAHV 

       130        140        150        160        170        180 
AAKGAGDWRA DVVHGHDWQA GLVPEYLAGL GCDTPFILTI HNVAFHGNTG AEKLDALRLD 

       190        200        210        220        230        240 
PDRFNADQYE FWGQISALKA GLMGAAQITT VSQTYAEELM TPQFGMGMDG VLRHRRDALT 

       250        260        270        280        290        300 
GIVNGIDLDV WNPETDPQIT PYTTFKGKAA NKAALQAEFG LSKAPGPLCV LVSRLTDQKG 

       310        320        330        340        350        360 
IDLLLDAMHV VLERGGQVAV LGSGAPDLEV CLLERADAEP NLAVKIGYDE ALSHRMMAGG 

       370        380        390        400        410        420 
DCILVPSRFE PCGLTQLYGL RYGTLPLVAL TGGLADTVIN ASPAALARRV ATGIQFSPIT 

       430        440        450        460        470 
AEALANAFSR LCDLYADRKT WTAMVRNAMK QPVGWDMSAS RYHALYKATA RK 

« Hide

References

[1]"Complete sequence of chromosome of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000264 Genomic DNA. Translation: ABD56032.1.
RefSeqYP_511057.1. NC_007802.1.

3D structure databases

ProteinModelPortalQ28MN0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_3115.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD56032; ABD56032; Jann_3115.
GeneID3935586.
KEGGjan:Jann_3115.
PATRIC22150090. VBIJanSp43325_3295.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294941.
KOK00703.
OMAVHCNDWQ.
OrthoDBEOG6JTC6Z.
ProtClustDBPRK00654.

Enzyme and pathway databases

BioCycJSP290400:GI1R-3150-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_JANSC
AccessionPrimary (citable) accession number: Q28MN0
Entry history
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: April 4, 2006
Last modified: February 19, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways