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Protein

Glycogen synthase

Gene

glgA

Organism
Jannaschia sp. (strain CCS1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei16 – 161ADP-glucoseUniRule annotation

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3150-MONOMER.
UniPathwayiUPA00164.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
Alternative name(s):
Starch [bacterial glycogen] synthaseUniRule annotation
Gene namesi
Name:glgAUniRule annotation
Ordered Locus Names:Jann_3115
OrganismiJannaschia sp. (strain CCS1)
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
ProteomesiUP000008326 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 472472Glycogen synthasePRO_0000241793Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_3115.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiDSHIAYR.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

Q28MN0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRVLSVASE CAPLVKTGGL ADVVGALPGA MAALGDELRT LVPGYATMPV
60 70 80 90 100
VGGAVVAAFD DLFGGPATVD ALTHEGLDLL ILRAPHLFDR PGGLYIDAFG
110 120 130 140 150
ADWPDNAERF AALSYAAAHV AAKGAGDWRA DVVHGHDWQA GLVPEYLAGL
160 170 180 190 200
GCDTPFILTI HNVAFHGNTG AEKLDALRLD PDRFNADQYE FWGQISALKA
210 220 230 240 250
GLMGAAQITT VSQTYAEELM TPQFGMGMDG VLRHRRDALT GIVNGIDLDV
260 270 280 290 300
WNPETDPQIT PYTTFKGKAA NKAALQAEFG LSKAPGPLCV LVSRLTDQKG
310 320 330 340 350
IDLLLDAMHV VLERGGQVAV LGSGAPDLEV CLLERADAEP NLAVKIGYDE
360 370 380 390 400
ALSHRMMAGG DCILVPSRFE PCGLTQLYGL RYGTLPLVAL TGGLADTVIN
410 420 430 440 450
ASPAALARRV ATGIQFSPIT AEALANAFSR LCDLYADRKT WTAMVRNAMK
460 470
QPVGWDMSAS RYHALYKATA RK
Length:472
Mass (Da):50,084
Last modified:April 4, 2006 - v1
Checksum:i3F1416B5EDC01398
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD56032.1.
RefSeqiWP_011456236.1. NC_007802.1.
YP_511057.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD56032; ABD56032; Jann_3115.
GeneIDi3935586.
KEGGijan:Jann_3115.
PATRICi22150090. VBIJanSp43325_3295.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD56032.1.
RefSeqiWP_011456236.1. NC_007802.1.
YP_511057.1. NC_007802.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_3115.

Protein family/group databases

CAZyiGT5. Glycosyltransferase Family 5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD56032; ABD56032; Jann_3115.
GeneIDi3935586.
KEGGijan:Jann_3115.
PATRICi22150090. VBIJanSp43325_3295.

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294941.
KOiK00703.
OMAiDSHIAYR.
OrthoDBiEOG6JTC6Z.

Enzyme and pathway databases

UniPathwayiUPA00164.
BioCyciJSP290400:GI1R-3150-MONOMER.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CCS1.

Entry informationi

Entry nameiGLGA_JANSC
AccessioniPrimary (citable) accession number: Q28MN0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 27, 2006
Last sequence update: April 4, 2006
Last modified: April 1, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.