Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q28LY5 (Q28LY5_JANSC) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Jann_3360 EMBL ABD56277.1
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD56277.1
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length648 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q28LY5 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 054502AED4A2B3EB

FASTA64868,302
        10         20         30         40         50         60 
MFLANMTLKT KLIVTIAAML ILLAGVLGYL GTQKIQAALN ESISAEERAG IRALVYTLQT 

        70         80         90        100        110        120 
SHAALTQHAG ADAGGFEITW PRMPNTLMFD DVDAASAISG LKPTVFHFDA ETGDFMRIAT 

       130        140        150        160        170        180 
TMREENGNRS VATPLARGPV YDALINGETF SGAAEVRGHL FRALYVPVFD GTGAIVGAFA 

       190        200        210        220        230        240 
VGRPIETLTA MIRQNMIETL LVTLGILTVM VLVAFFSIRN MLAPLTHVAR SLGKLSEGTL 

       250        260        270        280        290        300 
DEDIGHQNRN DEIGKISKAM VVLQESMQTA EELKAADVER STIVAAKQQE QDIVVTALTQ 

       310        320        330        340        350        360 
GLSRLGNLDL TQQIENTPEA PFPADYEELR TSYNMLLDNL SESVEAIRDV ATEVSHDARE 

       370        380        390        400        410        420 
MAEASSDLSS RTESQAATLE QSAAALEEMS ASVLSTAANA SDAETTTQEN RTNAKRTGEI 

       430        440        450        460        470        480 
VDTAIKAMSA IEESSKKITQ IISVIDDIAF QTNLLALNAG VEAARAGEAG RGFAVVASEV 

       490        500        510        520        530        540 
RALAQHSSAS AQEIKGLIAS SSDHVDNGSK LVHDAGRSIN DIIDRVDRVT SLVSDIAVSA 

       550        560        570        580        590        600 
KEQSIGVTEI NAAVRDLDTA TQGNAAMAEE TSAASEGLTN AADRLASHLA RFKLADASDA 

       610        620        630        640 
NWAAAAATAP AARAADGPQD ADAFAPPSPA IGGTRSASTA PVNAFQDF 

« Hide

References

[1]"Complete sequence of chromosome of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000264 Genomic DNA. Translation: ABD56277.1.
RefSeqYP_511302.1. NC_007802.1.

3D structure databases

ProteinModelPortalQ28LY5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_3360.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD56277; ABD56277; Jann_3360.
GeneID3935833.
KEGGjan:Jann_3360.
PATRIC22150606. VBIJanSp43325_3551.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0840.
KOK03406.
OMAGMWFIGM.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycJSP290400:GI1R-3397-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ28LY5_JANSC
AccessionPrimary (citable) accession number: Q28LY5
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: June 11, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)