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Protein

30S ribosomal protein S21

Gene

rpsU

Organism
Jannaschia sp. (strain CCS1)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3936-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S21UniRule annotation
Gene namesi
Name:rpsUUniRule annotation
Ordered Locus Names:Jann_3891
OrganismiJannaschia sp. (strain CCS1)
Taxonomic identifieri290400 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia
Proteomesi
  • UP000008326 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 686830S ribosomal protein S21PRO_0000266692Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi290400.Jann_3891.

Structurei

3D structure databases

ProteinModelPortaliQ28KF4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S21P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiRGYYEKP.
OrthoDBiPOG091H0359.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q28KF4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVSVRDNNV DQALRALKKK LQREGVFREM KLKQHYEKPS EKRAREKAEA
60
IRRARKLARK KLQREGML
Length:68
Mass (Da):8,175
Last modified:April 4, 2006 - v1
Checksum:i9EDBB25B313D78C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD56808.1.
RefSeqiWP_011457005.1. NC_007802.1.

Genome annotation databases

EnsemblBacteriaiABD56808; ABD56808; Jann_3891.
KEGGijan:Jann_3891.
PATRICi22151700. VBIJanSp43325_4093.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000264 Genomic DNA. Translation: ABD56808.1.
RefSeqiWP_011457005.1. NC_007802.1.

3D structure databases

ProteinModelPortaliQ28KF4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi290400.Jann_3891.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD56808; ABD56808; Jann_3891.
KEGGijan:Jann_3891.
PATRICi22151700. VBIJanSp43325_4093.

Phylogenomic databases

eggNOGiENOG4105K5G. Bacteria.
COG0828. LUCA.
HOGENOMiHOG000157459.
KOiK02970.
OMAiRGYYEKP.
OrthoDBiPOG091H0359.

Enzyme and pathway databases

BioCyciJSP290400:GI1R-3936-MONOMER.

Family and domain databases

HAMAPiMF_00358. Ribosomal_S21. 1 hit.
InterProiIPR001911. Ribosomal_S21.
IPR018278. Ribosomal_S21_CS.
[Graphical view]
PfamiPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
ProDomiPD005521. Ribosomal_S21. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00030. S21p. 1 hit.
PROSITEiPS01181. RIBOSOMAL_S21. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS21_JANSC
AccessioniPrimary (citable) accession number: Q28KF4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 12, 2006
Last sequence update: April 4, 2006
Last modified: September 7, 2016
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.