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Q28K20 (Q28K20_JANSC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Jann_4025 EMBL ABD56942.1
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD56942.1
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Sequences

Sequence LengthMass (Da)Tools
Q28K20 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 48A7F2F99FC6E867

FASTA47751,245
        10         20         30         40         50         60 
MDNAKNFYID GKWVAPATAR DMAVINPSTE EVCETISLGD QADTDAAVAA ASRAFGPWSA 

        70         80         90        100        110        120 
LSPAERIAVA ERLLEVYKAR SEDMAQAISL EMGAPQDLAR AQQVGAGSWH LEGFIRAAKN 

       130        140        150        160        170        180 
FVWDHPLGDW APNERTVYEP IGVCALITPW NWPMNQIVLK VVPALLTGCT MILKPSEIAP 

       190        200        210        220        230        240 
LSGILFSEMM DEAGVPAGVY NMLNGDGPGV GSQLSAHKDV DMVSFTGSTR AGRLISKAGA 

       250        260        270        280        290        300 
DTIKRISLEL GGKGANIIFA DADEKAVKQG VIRCFRNTGQ SCNAPTRMLV ERSRYDEAVE 

       310        320        330        340        350        360 
QAAETAAKVT VGPASEEGRH IGPAVSEVQF NKIQDLIQVG IDEGARLLAG GVGRPENLNR 

       370        380        390        400        410        420 
GYYIRPTVFA DVTPDMTIYR EEIFGPVLSI LPFDSEDEAV AIANDTDYGL TNYIQTGDTE 

       430        440        450        460        470 
KLRRVARQLR SGMVEGNGQG FAQGSPFGGY KQSGNGREGG RFGLHEFLET KAVSGWG 

« Hide

References

[1]"Complete sequence of chromosome of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000264 Genomic DNA. Translation: ABD56942.1.
RefSeqYP_511967.1. NC_007802.1.

3D structure databases

ProteinModelPortalQ28K20.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_4025.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD56942; ABD56942; Jann_4025.
GeneID3936513.
KEGGjan:Jann_4025.
PATRIC22152002. VBIJanSp43325_4237.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1012.
HOGENOMHOG000271505.
KOK00128.
OMAYKKSGNG.
OrthoDBEOG6BS8QW.
ProtClustDBCLSK773107.

Enzyme and pathway databases

BioCycJSP290400:GI1R-4077-MONOMER.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ28K20_JANSC
AccessionPrimary (citable) accession number: Q28K20
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: November 13, 2013
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)