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Q28JE4 (Q28JE4_JANSC) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Jann_4252 EMBL ABD57168.1
Encoded onPlasmid pCCS1
OrganismJannaschia sp. (strain CCS1) [Complete proteome] [HAMAP] EMBL ABD57168.1
Taxonomic identifier290400 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeJannaschia

Protein attributes

Sequence length526 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Plasmid EMBL ABD57168.1
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q28JE4 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 5CF1F8F05D29FD0C

FASTA52656,703
        10         20         30         40         50         60 
MTRPTVRIIA ALFVVGVLYR LYPIVLGMPS LSSAFLTEDG YLMLTVARNM AIGLGMSVSE 

        70         80         90        100        110        120 
GTIVTNGIQP LVTFLFTLPY LMTGGDKVTS LIGIHLIMTA ACIGAFLALR SLTARLLLEQ 

       130        140        150        160        170        180 
GASAVLAWAV ALMWFLGPNL LRHSMNGLET GLITLFTVLV LVQFGRVLAQ GADGNLLDRL 

       190        200        210        220        230        240 
ALGVLCGLAF LARIDAALLV IAVFFVWALD CLFRQRLGFF ASVWRLLLPG VVTLILAGPW 

       250        260        270        280        290        300 
LLNNLLNFGS LMPISGSAQS VGAVFGNNAH LLPAKLFEHV FPMLPIPRNL EEVSVIMIVC 

       310        320        330        340        350        360 
VLGIVAVIGP FLWRVIRSGD PVIRAVVLAY ALHALALILY YGLFFGAPHF LSRYLAPLAP 

       370        380        390        400        410        420 
LFLIAAVSTA LDLGRWLRLK KTETPALLLS FGGLALSSAL LVRLLLPGAP VQGHMQIVAW 

       430        440        450        460        470        480 
AEANVPDHVW VGAIQTGTLG YWHDRTINLD GKVNPDALNA VQTEGHVLAY AVQSDIDYVI 

       490        500        510        520 
DWVGVGAWAD DPAGNFSTVF ELVVEDPRVN IAVLARRIPR QPIGAD 

« Hide

References

[1]"Complete sequence of plasmid 1 of Jannaschia sp. CCS1."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D., Han C., Tapia R., Gilna P., Chertkov O., Saunders E., Schmutz J., Larimer F. expand/collapse author list , Land M., Kyrpides N., Lykidis A., Moran M.A., Belas R., Ye W., Buchan A., Gonzalez J.M., Schell M.A., Richardson P.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CCS1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000265 Genomic DNA. Translation: ABD57168.1.
RefSeqYP_512192.1. NC_007801.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING290400.Jann_4252.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABD57168; ABD57168; Jann_4252.
GeneID3932404.
KEGGjan:Jann_4252.
PATRIC22143531. VBIJanSp43325_0045.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG146862.
HOGENOMHOG000126827.
OMAVIFAVEA.
OrthoDBEOG6RJV4K.

Enzyme and pathway databases

BioCycJSP290400:GI1R-4304-MONOMER.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameQ28JE4_JANSC
AccessionPrimary (citable) accession number: Q28JE4
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: July 9, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)