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Protein

Trans-2-enoyl-CoA reductase, mitochondrial

Gene

mecr

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Oxidoreductase with a preference for short and medium chain substrates, including trans-2-hexenoyl-CoA (C6), trans-2-decenoyl-CoA (C10), and trans-2-hexadecenoyl-CoA (C16). May play a role in mitochondrial fatty acid synthesis (By similarity). Functions in pronephros development, regulating late differentiation of all pronephric tubule segments.By similarity1 Publication

Catalytic activityi

Acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei141 – 1411NADPBy similarity
Binding sitei345 – 3451NADPBy similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi167 – 1704NADPBy similarity
Nucleotide bindingi190 – 1923NADPBy similarity
Nucleotide bindingi259 – 2624NADPBy similarity
Nucleotide bindingi284 – 2863NADPBy similarity

GO - Molecular functioni

  1. trans-2-enoyl-CoA reductase (NADPH) activity Source: UniProtKB-EC
  2. zinc ion binding Source: InterPro

GO - Biological processi

  1. fatty acid biosynthetic process Source: UniProtKB-KW
  2. pronephric nephron tubule development Source: UniProtKB
Complete GO annotation...

Keywords - Molecular functioni

Developmental protein, Oxidoreductase

Keywords - Biological processi

Fatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism

Keywords - Ligandi

NADP

Names & Taxonomyi

Protein namesi
Recommended name:
Trans-2-enoyl-CoA reductase, mitochondrialBy similarity (EC:1.3.1.38)
Gene namesi
Name:mecrImported
ORF Names:TEgg103l11.1
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
ProteomesiUP000008143 Componenti: Unplaced

Organism-specific databases

XenbaseiXB-GENE-1007523. mecr.

Subcellular locationi

Mitochondrion By similarity

GO - Cellular componenti

  1. mitochondrion Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 1212MitochondrionSequence AnalysisAdd
BLAST
Chaini13 – 350338Trans-2-enoyl-CoA reductase, mitochondrialSequence AnalysisPRO_0000391692Add
BLAST

Expressioni

Tissue specificityi

Expressed in the developing pronephros.1 Publication

Gene expression databases

BgeeiQ28GQ2.

Interactioni

Subunit structurei

Homodimer.By similarity

Protein-protein interaction databases

STRINGi8364.ENSXETP00000031439.

Structurei

3D structure databases

ProteinModelPortaliQ28GQ2.
SMRiQ28GQ2. Positions 12-350.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0604.
GeneTreeiENSGT00740000115589.
HOGENOMiHOG000294683.
HOVERGENiHBG052446.
InParanoidiQ28GQ2.
KOiK07512.
OMAiWGYKSIN.
OrthoDBiEOG78M024.
TreeFamiTF312886.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_GroES-like.
IPR002085. ADH_SF_Zn-type.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q28GQ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MWLGLRLFHR PFSSLAARGL VYEKHGEPLQ VLRLKNVNIT HPADNEVRVK
60 70 80 90 100
MLAAPINPSD INMVQGTYAL LPQLPAVGGN EGVGVVVEIG RHVSSMRPGD
110 120 130 140 150
WVVPVDAGLG TWCTEAVFSE DSLVRVPSDI PVAGAATVSV NPCTAYRLLS
160 170 180 190 200
DFETLRPGDT IIQNASNSGV GQAVIQIATS LGITTINVVR DREDLSSLIQ
210 220 230 240 250
RLRDLGADHV ITEEQLRKPE MKDLFKNCPR PRLALNCVGG KSTTEMLRHL
260 270 280 290 300
DYGGTMVTYG GMSKQPVTVP VSALIFKNVK LCGFWVTQWK KERAQTDREE
310 320 330 340 350
IVKMIRDLCD LIRRGKLVPP PSTQRPLEDF SRALQDSQTP FLSRKQILIM
Length:350
Mass (Da):38,669
Last modified:April 3, 2006 - v1
Checksum:i48814881CBDED83B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR761275 mRNA. Translation: CAJ83709.1.
RefSeqiNP_001016371.1. NM_001016371.2.
UniGeneiStr.26937.

Genome annotation databases

EnsembliENSXETT00000031439; ENSXETP00000031439; ENSXETG00000014371.
GeneIDi549125.
KEGGixtr:549125.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR761275 mRNA. Translation: CAJ83709.1.
RefSeqiNP_001016371.1. NM_001016371.2.
UniGeneiStr.26937.

3D structure databases

ProteinModelPortaliQ28GQ2.
SMRiQ28GQ2. Positions 12-350.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi8364.ENSXETP00000031439.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSXETT00000031439; ENSXETP00000031439; ENSXETG00000014371.
GeneIDi549125.
KEGGixtr:549125.

Organism-specific databases

CTDi51102.
XenbaseiXB-GENE-1007523. mecr.

Phylogenomic databases

eggNOGiCOG0604.
GeneTreeiENSGT00740000115589.
HOGENOMiHOG000294683.
HOVERGENiHBG052446.
InParanoidiQ28GQ2.
KOiK07512.
OMAiWGYKSIN.
OrthoDBiEOG78M024.
TreeFamiTF312886.

Gene expression databases

BgeeiQ28GQ2.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_GroES-like.
IPR002085. ADH_SF_Zn-type.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Sanger Xenopus tropicalis EST/cDNA project
    Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: EggImported.
  2. "A functional screen for genes involved in Xenopus pronephros development."
    Kyuno J., Masse K., Jones E.A.
    Mech. Dev. 125:571-586(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: FUNCTION, TISSUE SPECIFICITY.

Entry informationi

Entry nameiMECR_XENTR
AccessioniPrimary (citable) accession number: Q28GQ2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 1, 2010
Last sequence update: April 3, 2006
Last modified: January 6, 2015
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.