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Q28GE2

- Q28GE2_XENTR

UniProt

Q28GE2 - Q28GE2_XENTR

Protein
Submitted name:

Tumor differentially expressed 1

Gene

serinc3

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 44 (01 Oct 2014)
      Sequence version 1 (04 Apr 2006)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Tumor differentially expressed 1Imported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:serinc3Imported
    Synonyms:tde1Imported
    ORF Names:TEgg009n11.1-001Imported
    OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
    Taxonomic identifieri8364 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
    ProteomesiUP000008143: Unplaced

    Organism-specific databases

    XenbaseiXB-GENE-950521. serinc3.

    Subcellular locationi

    GO - Cellular componenti

    1. membrane Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG308011.
    GeneTreeiENSGT00550000074522.
    HOGENOMiHOG000165463.
    HOVERGENiHBG025699.
    OMAiLAWIMLT.
    OrthoDBiEOG7TXKGQ.
    TreeFamiTF312881.

    Family and domain databases

    InterProiIPR029557. Serinc3.
    IPR005016. TDE1/TMS.
    [Graphical view]
    PANTHERiPTHR10383. PTHR10383. 1 hit.
    PTHR10383:SF13. PTHR10383:SF13. 1 hit.
    PfamiPF03348. Serinc. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q28GE2-1 [UniParc]FASTAAdd to Basket

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    MGGVLGLCSV ASWIPCLCSS ATCLLCRCCP NTGNSTVTRI VYAFLMLLGA    50
    ILSCIMLSPG ISDQLKKVPG FCEDGFGTQL PHVDGYVNCN VLVGYKAVYR 100
    VSFAMTLFFL AMSIFMLGVK TSKDPRAAIH NGFWFFKVLA LAGIMVGAFY 150
    IPEGHFTSAW FWIGVCGACC FIIFQLILLV DFAHSLNESW VNRMEDGNSK 200
    CWYAVLLSFT ILCYSLSIIG VVLLYVYYTK SDGCTENKFF ISFNMILCVI 250
    VSVISILPKV QEHQPRSGLL QSSVITLYTM YLTWSSMSNE PDRSCNPSLL 300
    SIISTINSPA IIPSNETILE PTPEPIKALQ WWDSQNIIGF ILFVACLMYS 350
    SIRNTTNSQV NKLTLSSNDT VILDDTTGSS DAEDGEVKRV IDNEKDGVQY 400
    NYSLFLFMLC LSSLYIMMTL TNWYSPTADT KTMTSTWPAV WFKISSSWVC 450
    LLLYFWTLIA PIVLSNRDFS 470
    Length:470
    Mass (Da):52,374
    Last modified:April 4, 2006 - v1
    Checksum:i8E254AB42F39A983
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01020297 Genomic DNA. No translation available.
    CR761424 mRNA. Translation: CAJ82242.1.
    RefSeqiNP_001016331.1. NM_001016331.2.
    UniGeneiStr.1226.

    Genome annotation databases

    EnsembliENSXETT00000003695; ENSXETP00000003695; ENSXETG00000001778.
    GeneIDi549085.
    KEGGixtr:549085.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAMC01020297 Genomic DNA. No translation available.
    CR761424 mRNA. Translation: CAJ82242.1 .
    RefSeqi NP_001016331.1. NM_001016331.2.
    UniGenei Str.1226.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSXETT00000003695 ; ENSXETP00000003695 ; ENSXETG00000001778 .
    GeneIDi 549085.
    KEGGi xtr:549085.

    Organism-specific databases

    CTDi 10955.
    Xenbasei XB-GENE-950521. serinc3.

    Phylogenomic databases

    eggNOGi NOG308011.
    GeneTreei ENSGT00550000074522.
    HOGENOMi HOG000165463.
    HOVERGENi HBG025699.
    OMAi LAWIMLT.
    OrthoDBi EOG7TXKGQ.
    TreeFami TF312881.

    Family and domain databases

    InterProi IPR029557. Serinc3.
    IPR005016. TDE1/TMS.
    [Graphical view ]
    PANTHERi PTHR10383. PTHR10383. 1 hit.
    PTHR10383:SF13. PTHR10383:SF13. 1 hit.
    Pfami PF03348. Serinc. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    3. Ensembl
      Submitted (JUN-2011) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiQ28GE2_XENTR
    AccessioniPrimary (citable) accession number: Q28GE2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 4, 2006
    Last sequence update: April 4, 2006
    Last modified: October 1, 2014
    This is version 44 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3