Q28FU2 (Q28FU2_XENTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transmembrane protein 4 EMBL CAJ83978.1

Submitted name:
Uncharacterized protein Ensembl ENSXETP00000020996

Gene names

Name:	cnpy2 Ensembl ENSXETP00000020996 Xenbase XB-GENE-943173
Synonyms:	tmem4 EMBL CAJ83978.1
ORF Names:	TGas032h19.1-001 EMBL CAJ83978.1

Organism

Xenopus tropicalis (Western clawed frog) (Silurana tropicalis) [Reference proteome]

Taxonomic identifier

8364 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amphibia › Batrachia › Anura › Pipoidea › Pipidae › Xenopodinae › Xenopus › Silurana

Protein attributes

Sequence length	184 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Membrane
Domain	Transmembrane EMBL CAJ83978.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q28FU2 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 991673830665158F	FASTA	184	20,980
	10 20 30 40 50 60 MTSRTFSCLL LPIALVALVG YACARRGQDV HCGACRALVD ELEWEISQVD PKKTIQKGSF 70 80 90 100 110 120 RINPDGTQSV IEVPYARSEA HLMEVLEQIC EKMTEYGEKI DPSTDRKIYV RVVSRDGKKM 130 140 150 160 170 180 DASGTNIDIE VTSNLKFTCE RIVEEYEDEL IEFFSHEREN VKDKLCSKRT DLCDHAVHIP HDEL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Amaya E., Ashurst J.L., Bonfield J.K., Croning M.D.R., Chen C-K., Davies R.M., Francis M.D., Garrett N., Gilchrist M.J., Grafham D.V., McLaren S.R., Papalopulu N., Rogers J., Smith J.C., Taylor R.G., Voigt J., Zorn A.M. Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	NIH - Xenopus Gene Collection (XGC) project Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: PopA EMBL AAI66940.1. Tissue: Whole EMBL AAI66940.1.
[3]	NIH - Xenopus Gene Collection (XGC) project Submitted (NOV-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Gastrula EMBL AAI70706.1.
[4]	"The genome of the Western clawed frog Xenopus tropicalis." Hellsten U., Harland R.M., Gilchrist M.J., Hendrix D., Jurka J., Kapitonov V., Ovcharenko I., Putnam N.H., Shu S., Taher L., Blitz I.L., Blumberg B., Dichmann D.S., Dubchak I., Amaya E., Detter J.C., Fletcher R., Gerhard D.S. , Goodstein D., Graves T., Grigoriev I.V., Grimwood J., Kawashima T., Lindquist E., Lucas S.M., Mead P.E., Mitros T., Ogino H., Ohta Y., Poliakov A.V., Pollet N., Robert J., Salamov A., Sater A.K., Schmutz J., Terry A., Vize P.D., Warren W.C., Wells D., Wills A., Wilson R.K., Zimmerman L.B., Zorn A.M., Grainger R., Grammer T., Khokha M.K., Richardson P.M., Rokhsar D.S. Science 328:633-636(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[5]	Ensembl Submitted (JUN-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AAMC01034965 Genomic DNA. No translation available. BC166940 mRNA. Translation: AAI66940.1. BC170706 mRNA. Translation: AAI70706.1. BC170708 mRNA. Translation: AAI70708.1. CR761752 mRNA. Translation: CAJ83978.1.
RefSeq	NP_001016251.1. NM_001016251.2.
UniGene	Str.26864.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSXETT00000020996; ENSXETP00000020996; ENSXETG00000009510.
GeneID	549005.
KEGG	xtr:549005.
Organism-specific databases
CTD	10330.
Xenbase	XB-GENE-943173. cnpy2.
Phylogenomic databases
eggNOG	NOG280279.
GeneTree	ENSGT00390000009749.
HOGENOM	HOG000233996.
HOVERGEN	HBG052514.
OMA	FSHEREN.
OrthoDB	EOG45490T.
Family and domain databases
InterPro	IPR021852. DUF3456. IPR008139. SaposinB. [Graphical view]
Pfam	PF11938. DUF3456. 1 hit. [Graphical view]
PROSITE	PS50015. SAP_B. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q28FU2_XENTR

Accession

Primary (citable) accession number: Q28FU2

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	January 9, 2013
This is version 43 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)