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Protein
Submitted name:

Novel solute carrier family 19 protein

Gene

slc19a2

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-XTR-196819. Vitamin B1 (thiamin) metabolism.

Names & Taxonomyi

Protein namesi
Submitted name:
Novel solute carrier family 19 proteinImported
Submitted name:
Solute carrier family 19 (thiamine transporter), member 2Imported
Gene namesi
Name:slc19a2Imported
ORF Names:TGas049p21.1-001Imported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-5732458. slc19a2.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei54 – 74HelicalSequence analysisAdd BLAST21
Transmembranei81 – 99HelicalSequence analysisAdd BLAST19
Transmembranei146 – 164HelicalSequence analysisAdd BLAST19
Transmembranei170 – 192HelicalSequence analysisAdd BLAST23
Transmembranei260 – 277HelicalSequence analysisAdd BLAST18
Transmembranei297 – 318HelicalSequence analysisAdd BLAST22
Transmembranei325 – 347HelicalSequence analysisAdd BLAST23
Transmembranei353 – 378HelicalSequence analysisAdd BLAST26
Transmembranei385 – 403HelicalSequence analysisAdd BLAST19
Transmembranei423 – 443HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSXETG00000008390.

Interactioni

Protein-protein interaction databases

STRINGi8364.ENSXETP00000018382.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3810. Eukaryota.
ENOG410XT34. LUCA.
GeneTreeiENSGT00510000046382.
HOGENOMiHOG000001583.
HOVERGENiHBG054198.
KOiK14610.
OMAiLVRYKPV.
OrthoDBiEOG091G0BSJ.
TreeFamiTF313684.

Family and domain databases

InterProiView protein in InterPro
IPR002666. Folate_carrier.
IPR020846. MFS_dom.
IPR028337. ThTr-2.
PANTHERiPTHR10686. PTHR10686. 1 hit.
PfamiView protein in Pfam
PF01770. Folate_carrier. 1 hit.
PIRSFiPIRSF028739. Folate_carrier. 1 hit.
PIRSF500795. Thiamine_transporter_2. 1 hit.
SUPFAMiSSF103473. SSF103473. 2 hits.
TIGRFAMsiTIGR00806. rfc. 1 hit.

Sequencei

Sequence statusi: Complete.

Q28C92-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVCGKEYTS GWKYPTILLC LFGFFADMRA VDPFTAQYFT GSYHNLTVEQ
60 70 80 90 100
VKNSVLPVWT YSYIALLIPV FLLTDYLRYK PIIVLQALGL SISMLLMLIT
110 120 130 140 150
RGEAAMQGME FAYAIFSSCD VAYYSYIYSM VDIVYYQRVT SYCRSITLVA
160 170 180 190 200
ATLGALLQQI LMSFAGVSYF YLNILTLTSA LVSLVCSMFL PVPSRSMFFH
210 220 230 240 250
KKMPGDTILS KQARSPKMET TEDTNMLKGC EAERASNTNF FNVIWLLCKE
260 270 280 290 300
VKECYWSRKI LYWSLWWAFA TPIYNLLVNY SQLLWVYVEP SGKINAYNSA
310 320 330 340 350
VDAASTFLGA ILSMGAGFVK VDCELFGEAA LTCLSIIDAG VLLFMGFSRT
360 370 380 390 400
VWISYAGYLI FKSSYMLLIT IATFNIAVNL SMERYALLFG FNTLVALFIQ
410 420 430 440 450
TLLTVVVDHR RLGLDLITQF LVYGSYFSVV AVMFMLWTTY LLMSHYCKSP
460 470 480
GSDLHSTITA MSQGYGLNSP TAGSGASHKV SDEPSVGQ
Length:488
Mass (Da):54,716
Last modified:April 4, 2006 - v1
Checksum:i0B711030EA7A7DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01022131 Genomic DNA. No translation available.
CR942394 mRNA. Translation: CAJ82499.1.
RefSeqiNP_001039201.1. NM_001045736.1.
UniGeneiStr.36792.

Genome annotation databases

EnsembliENSXETT00000018382; ENSXETP00000018382; ENSXETG00000008390.
GeneIDi734059.
KEGGixtr:734059.

Similar proteinsi

Entry informationi

Entry nameiQ28C92_XENTR
AccessioniPrimary (citable) accession number: Q28C92
Entry historyiIntegrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: June 7, 2017
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported