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Protein
Submitted name:

E-selectin

Gene
N/A
Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandLectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
E-selectinImported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei430 – 452HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_500420390023 – 482Sequence analysisAdd BLAST460

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi166 ↔ 175PROSITE-ProRule annotation
Disulfide bondi208 ↔ 235PROSITE-ProRule annotation
Disulfide bondi271 ↔ 298PROSITE-ProRule annotation
Disulfide bondi334 ↔ 361PROSITE-ProRule annotation
Disulfide bondi393 ↔ 420PROSITE-ProRule annotation

Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ28982
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 140C-type lectinInterPro annotationAdd BLAST121
Domaini140 – 176EGF-likeInterPro annotationAdd BLAST37
Domaini179 – 237SushiInterPro annotationAdd BLAST59
Domaini251 – 300SushiInterPro annotationAdd BLAST50
Domaini301 – 363SushiInterPro annotationAdd BLAST63
Domaini364 – 422SushiInterPro annotationAdd BLAST59

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, SushiPROSITE-ProRule annotationSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410XPJ1 LUCA
HOGENOMiHOG000236254
HOVERGENiHBG052375

Family and domain databases

CDDicd00033 CCP, 4 hits
cd03592 CLECT_selectins_like, 1 hit
Gene3Di3.10.100.10, 1 hit
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR018378 C-type_lectin_CS
IPR016187 CTDL_fold
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR033991 Selectin_CTLD
IPR002396 Selectin_superfamily
IPR035976 Sushi/SCR/CCP_sf
IPR000436 Sushi_SCR_CCP_dom
PfamiView protein in Pfam
PF00059 Lectin_C, 1 hit
PF00084 Sushi, 4 hits
PRINTSiPR00343 SELECTIN
SMARTiView protein in SMART
SM00032 CCP, 4 hits
SM00034 CLECT, 1 hit
SUPFAMiSSF56436 SSF56436, 1 hit
SSF57535 SSF57535, 4 hits
PROSITEiView protein in PROSITE
PS00615 C_TYPE_LECTIN_1, 1 hit
PS50041 C_TYPE_LECTIN_2, 1 hit
PS00022 EGF_1, 1 hit
PS01186 EGF_2, 1 hit
PS50026 EGF_3, 1 hit
PS50923 SUSHI, 4 hits

Sequencei

Sequence statusi: Complete.

Q28982-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIASQFLSAL PLVLLLLRES GAWSYSASTE TMTFDDASAY CQQRYTHLVA
60 70 80 90 100
IQNHAEIEYL NSTFNYSASY YWIGIRKING TWTWIGTKKA LTPEATNWAP
110 120 130 140 150
GEPNNKQSNE DCVEIYIKRD KDSGKWNDER CSKKKLALCY TAACTPTSCS
160 170 180 190 200
GHGECIETIN SSTCQCYPGF RGLQCEQVVE CDALENPVNG VVTCPQSLPW
210 220 230 240 250
NTTCAFECKE GFELIGPEHL QCTSSGSWDG KKPTCKAVTC DTVGHPQNGD
260 270 280 290 300
VSCNHSSIGE FAYKSTCHFT CAEGFGLQGP AQIECTAQGQ WTQQAPVCKA
310 320 330 340 350
VKCPAVSQPK NGLVKFTHSP TGEFTYKSSC AFSCEEGFEL RGSAQLACTS
360 370 380 390 400
QGQWTQEVPS CQVVQCSSLE VPREINMSCS GEPVFGAVCT FACPEGWMLN
410 420 430 440 450
GSVALTCGAT GHWSGMLPTC EAPAESKIPL AMGLAAGGVS FMTSASFLLW
460 470 480
LLKRLRKRAK NLFLPAAPNA FNPMDPTKCL LT
Length:482
Mass (Da):52,341
Last modified:November 1, 1996 - v1
Checksum:i97DC5D70BF115944
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U37521 Genomic DNA Translation: AAC48680.1
PIRiJC5092
UniGeneiSsc.16297

Similar proteinsi

Entry informationi

Entry nameiQ28982_PIG
AccessioniPrimary (citable) accession number: Q28982
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 23, 2018
This is version 114 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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