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Protein
Submitted name:

L-caldesmon

Gene
N/A
Organism
Oryctolagus cuniculus (Rabbit)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
L-caldesmonImported
OrganismiOryctolagus cuniculus (Rabbit)
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus

PTM / Processingi

PTM databases

iPTMnetiQ28708.

Interactioni

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000007026.

Structurei

3D structure databases

ProteinModelPortaliQ28708.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili1 – 5757Sequence analysisAdd
BLAST
Coiled coili94 – 12128Sequence analysisAdd
BLAST
Coiled coili270 – 36293Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG410IH1F. Eukaryota.
ENOG410ZMZI. LUCA.
HOGENOMiHOG000013012.
HOVERGENiHBG050785.

Family and domain databases

InterProiIPR006017. Caldesmon.
IPR006018. Caldesmon_LSP.
[Graphical view]
PANTHERiPTHR18949. PTHR18949. 1 hit.
PTHR18949:SF0. PTHR18949:SF0. 1 hit.
PfamiPF02029. Caldesmon. 1 hit.
[Graphical view]
PRINTSiPR01076. CALDESMON.

Sequencei

Sequence statusi: Complete.

Q28708-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDFERRREL RRQKREEMRL EAERIAYQRN DDDEEEAARE RRRRARQERL
60 70 80 90 100
RQKQEEESLG QVADQVEVHA QNSVSNEDSK PSTTSTQVEG DDEAALLERL
110 120 130 140 150
ARREERRQKR LQEALERQKE FDPTVTDASA SLPSRRMPND TAENATAEKE
160 170 180 190 200
AKAESRRERY ETVETKMVTK SEQKNDWRDA EDKKKDEKER EDGEEEKSKQ
210 220 230 240 250
ESVGENQVKD EKIKKDKEAK EEVKSFMDRK KGFTDVKSQN GEFMTHKLKH
260 270 280 290 300
AENTFSPGRS GARPSGDAQE AEAGKRLEEL RRRRGETESE EFEKLKQKQQ
310 320 330 340 350
EAALELEELK KKREERRKVL EEEEQRKKQE EADRKVREEE EKRRLKEEIE
360 370 380 390 400
RRRAEAAEKR QKMPEDGLSD DKKPFKCFTP KGSSLKIEER AEFLNKSVQK
410 420 430 440 450
SGVKSTHQAA VVSKIDSRLE QYTSAIEGTK AAKSTKPAAS DLPVPAEGVR
460 470 480 490 500
NIKSMWEKGN VFSAPTASGT PNKETAGLKV GVSSRINEWL TKTPDGSKSP
510 520 530
APKPSDLRPG DVSGKRNLWE KQSVDKVTSP TKV
Length:533
Mass (Da):61,482
Last modified:November 1, 1996 - v1
Checksum:iF9BEC5D7E8F59BF9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37147 mRNA. Translation: AAA67843.1.
UniGeneiOcu.2582.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
L37147 mRNA. Translation: AAA67843.1.
UniGeneiOcu.2582.

3D structure databases

ProteinModelPortaliQ28708.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000007026.

PTM databases

iPTMnetiQ28708.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG410IH1F. Eukaryota.
ENOG410ZMZI. LUCA.
HOGENOMiHOG000013012.
HOVERGENiHBG050785.

Family and domain databases

InterProiIPR006017. Caldesmon.
IPR006018. Caldesmon_LSP.
[Graphical view]
PANTHERiPTHR18949. PTHR18949. 1 hit.
PTHR18949:SF0. PTHR18949:SF0. 1 hit.
PfamiPF02029. Caldesmon. 1 hit.
[Graphical view]
PRINTSiPR01076. CALDESMON.
ProtoNetiSearch...

Publicationsi

  1. "Molecular cloning of rabbit caldesmon cDNA."
    Lin V.K., Lee I.-L., McConnell J.D.
    Submitted (JUN-1995) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: FibroblastImported.

Entry informationi

Entry nameiQ28708_RABIT
AccessioniPrimary (citable) accession number: Q28708
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 8, 2016
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.