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Protein
Submitted name:

HTH-type transcriptional regulator for conjugative element SXT

Gene

setR

Organism
Vibrio cholerae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHydrolaseImported

Protein family/group databases

MEROPSiS24.002.

Names & Taxonomyi

Protein namesi
Submitted name:
HTH-type transcriptional regulator for conjugative element SXTImported
Submitted name:
Putative cI prophage repressor proteinImported
Submitted name:
Putative phage repressor proteinImported (EC:3.4.21.88Imported)
Submitted name:
SetRImported
Submitted name:
Transcriptional regulatorImported
Submitted name:
Transcriptional repressorImported
Gene namesi
Name:setRImported
ORF Names:B2J67_03500Imported, B2J70_03690Imported, B7947_10290Imported, BTY66_13750Imported, CEF09_02180Imported, EN12_03285Imported, ERS013198_02201Imported, ERS013199_02806Imported, ERS013202_02343Imported, ERS013206_02088Imported, VC1786ICE_77Imported
OrganismiVibrio choleraeImported
Taxonomic identifieri666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000043247 Componenti: Unassembled WGS sequence
  • UP000192124 Componenti: Unassembled WGS sequence
  • UP000040416 Componenti: Unassembled WGS sequence
  • UP000197879 Componenti: Unassembled WGS sequence
  • UP000197575 Componenti: Unassembled WGS sequence
  • UP000198441 Componenti: Unassembled WGS sequence
  • UP000193951 Componenti: Unassembled WGS sequence
  • UP000045578 Componenti: Unassembled WGS sequence
  • UP000043560 Componenti: Unassembled WGS sequence
  • UP000036184 Componenti: Chromosome 1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 61HTH cro/C1-typeInterPro annotationAdd BLAST54

Family and domain databases

CDDicd00093. HTH_XRE. 1 hit.
InterProiView protein in InterPro
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR036286. LexA/Signal_pep-like_sf.
IPR015927. Peptidase_S24_S26A/B/C.
PfamiView protein in Pfam
PF01381. HTH_3. 1 hit.
PF00717. Peptidase_S24. 1 hit.
SMARTiView protein in SMART
SM00530. HTH_XRE. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF51306. SSF51306. 1 hit.
PROSITEiView protein in PROSITE
PS50943. HTH_CROC1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q284V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTLSERLNH ALQLTGVTQS ELARRIGIKQ QSISQICSGK SARSRYTMQI
60 70 80 90 100
AEALRVNAHW LATGDGEIGL GVGNVEVGPD IKGRIPLINW VQAGDWTEIA
110 120 130 140 150
EGFAHEDAEE WREVTGKAHE GCFALRVKGD SMENPSGKKS IPEGAVIVVD
160 170 180 190 200
PELPYSSGSL VVARLDDSKE ATFKQLVIDG EQKYLKPLNP QYPAIPINGN
210
CTIIGVVRQA IIDFW
Length:215
Mass (Da):23,491
Last modified:April 4, 2006 - v1
Checksum:iF536279FCC023262
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ180349 Genomic DNA. Translation: ABA87012.1.
JN648379 Genomic DNA. Translation: AEU11462.1.
KC886257 Genomic DNA. Translation: AHM25138.1.
CP007653 Genomic DNA. Translation: AKO74273.1.
KT151654 Genomic DNA. Translation: ALP44309.1.
KT151655 Genomic DNA. Translation: ALP44396.1.
KT151656 Genomic DNA. Translation: ALP44490.1.
KT151658 Genomic DNA. Translation: ALP44668.1.
KT151659 Genomic DNA. Translation: ALP44761.1.
KT151660 Genomic DNA. Translation: ALP44850.1.
KT151661 Genomic DNA. Translation: ALP44945.1.
KT151662 Genomic DNA. Translation: ALP45032.1.
KT151663 Genomic DNA. Translation: ALP45131.1.
KT151664 Genomic DNA. Translation: ALP45233.1.
CWQA01000011 Genomic DNA. Translation: CSC07964.1.
CWQG01000009 Genomic DNA. Translation: CSC20729.1.
CWQD01000010 Genomic DNA. Translation: CSC47109.1.
CWQX01000046 Genomic DNA. Translation: CSC81671.1.
MSEO01000013 Genomic DNA. Translation: OQM88779.1.
MWFL01000039 Genomic DNA. Translation: ORP12662.1.
MWRE01000036 Genomic DNA. Translation: OWO70341.1.
MWRC01000142 Genomic DNA. Translation: OWO91608.1.
NIWX01000004 Genomic DNA. Translation: OXB32969.1.
RefSeqiWP_000854920.1. NZ_NDXT01000012.1.

Genome annotation databases

EnsemblBacteriaiAKO74273; AKO74273; EN12_03285.
CSC07964; CSC07964; ERS013198_02201.
CSC19110; CSC19110; ERS013207_02180.
CSC20729; CSC20729; ERS013202_02343.
CSC47109; CSC47109; ERS013206_02088.
CSC81671; CSC81671; ERS013199_02806.
GeneIDi6803052.
KEGGivcq:EN18_06705.
PATRICifig|666.1966.peg.2668.

Similar proteinsi

Entry informationi

Entry nameiQ284V8_VIBCL
AccessioniPrimary (citable) accession number: Q284V8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: October 25, 2017
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported