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Protein
Submitted name:

HTH-type transcriptional regulator for conjugative element SXT

Gene

setR

Organism
Vibrio cholerae
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionHydrolaseImported

Protein family/group databases

MEROPSiS24.002

Names & Taxonomyi

Protein namesi
Submitted name:
HTH-type transcriptional regulator for conjugative element SXTImported
Submitted name:
Putative cI prophage repressor proteinImported
Submitted name:
Putative phage repressor proteinImported (EC:3.4.21.88Imported)
Submitted name:
SetRImported
Submitted name:
Transcriptional regulatorImported
Submitted name:
Transcriptional repressorImported
Gene namesi
Name:setRImported
ORF Names:B7947_10290Imported, BTY66_13750Imported, EN12_03285Imported, ERS013198_02201Imported, ERS013199_02806Imported, ERS013202_02343Imported, ERS013206_02088Imported, VC1786ICE_77Imported
OrganismiVibrio choleraeImported
Taxonomic identifieri666 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
Proteomesi
  • UP000043247 Componenti: Unassembled WGS sequence
  • UP000192124 Componenti: Unassembled WGS sequence
  • UP000040416 Componenti: Unassembled WGS sequence
  • UP000193951 Componenti: Unassembled WGS sequence
  • UP000045578 Componenti: Unassembled WGS sequence
  • UP000043560 Componenti: Unassembled WGS sequence
  • UP000036184 Componenti: Chromosome 1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 61HTH cro/C1-typeInterPro annotationAdd BLAST54

Family and domain databases

CDDicd00093 HTH_XRE, 1 hit
InterProiView protein in InterPro
IPR001387 Cro/C1-type_HTH
IPR010982 Lambda_DNA-bd_dom_sf
IPR036286 LexA/Signal_pep-like_sf
IPR015927 Peptidase_S24_S26A/B/C
PfamiView protein in Pfam
PF01381 HTH_3, 1 hit
PF00717 Peptidase_S24, 1 hit
SMARTiView protein in SMART
SM00530 HTH_XRE, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
SSF51306 SSF51306, 1 hit
PROSITEiView protein in PROSITE
PS50943 HTH_CROC1, 1 hit

Sequencei

Sequence statusi: Complete.

Q284V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTLSERLNH ALQLTGVTQS ELARRIGIKQ QSISQICSGK SARSRYTMQI
60 70 80 90 100
AEALRVNAHW LATGDGEIGL GVGNVEVGPD IKGRIPLINW VQAGDWTEIA
110 120 130 140 150
EGFAHEDAEE WREVTGKAHE GCFALRVKGD SMENPSGKKS IPEGAVIVVD
160 170 180 190 200
PELPYSSGSL VVARLDDSKE ATFKQLVIDG EQKYLKPLNP QYPAIPINGN
210
CTIIGVVRQA IIDFW
Length:215
Mass (Da):23,491
Last modified:April 4, 2006 - v1
Checksum:iF536279FCC023262
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ180349 Genomic DNA Translation: ABA87012.1
JN648379 Genomic DNA Translation: AEU11462.1
KC886257 Genomic DNA Translation: AHM25138.1
CP007653 Genomic DNA Translation: AKO74273.1
KT151654 Genomic DNA Translation: ALP44309.1
KT151655 Genomic DNA Translation: ALP44396.1
KT151656 Genomic DNA Translation: ALP44490.1
KT151658 Genomic DNA Translation: ALP44668.1
KT151659 Genomic DNA Translation: ALP44761.1
KT151660 Genomic DNA Translation: ALP44850.1
KT151661 Genomic DNA Translation: ALP44945.1
KT151662 Genomic DNA Translation: ALP45032.1
KT151663 Genomic DNA Translation: ALP45131.1
KT151664 Genomic DNA Translation: ALP45233.1
CWQA01000011 Genomic DNA Translation: CSC07964.1
CWQG01000009 Genomic DNA Translation: CSC20729.1
CWQD01000010 Genomic DNA Translation: CSC47109.1
CWQX01000046 Genomic DNA Translation: CSC81671.1
MSEO01000013 Genomic DNA Translation: OQM88779.1
MWFL01000039 Genomic DNA Translation: ORP12662.1
RefSeqiWP_000854920.1, NZ_PQCW01000001.1

Genome annotation databases

EnsemblBacteriaiAKO74273; AKO74273; EN12_03285
CSC07964; CSC07964; ERS013198_02201
CSC19110; CSC19110; ERS013207_02180
CSC20729; CSC20729; ERS013202_02343
CSC47109; CSC47109; ERS013206_02088
CSC81671; CSC81671; ERS013199_02806
GeneIDi6803052
KEGGivcq:EN18_06705
PATRICifig|666.1966.peg.2668

Similar proteinsi

Entry informationi

Entry nameiQ284V8_VIBCL
AccessioniPrimary (citable) accession number: Q284V8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 23, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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