Q283U5 (Q283U5_BPPH6) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Membrane protein EMBL ABK35417.1

Submitted name:
P5a EMBL ABB69811.1

Gene names

Name:	p5a EMBL ABB69811.1
Synonyms:	P5a EMBL ABK35417.1

Organism

Pseudomonas phage phi6 (Bacteriophage phi-6) EMBL ABB69811.1

Taxonomic identifier

10879 [NCBI]

Taxonomic lineage

Viruses › dsRNA viruses › Cystoviridae › Cystovirus

Virus host

Pseudomonas syringae pv. phaseolicola [TaxID: 319]

Protein attributes

Sequence length	220 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4DQ7 PDB 4DQ5 PDB 4DQJ
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q283U5 [UniParc]. Last modified April 4, 2006. Version 1. Checksum: 8827BEF9380DC74F	FASTA	220	24,023
	10 20 30 40 50 60 MSKDSAFAVQ YSLRALGQKV RADGVVGSET RAALDALPEN QKKAIVELQA LLPKAQSVGN 70 80 90 100 110 120 SRVRFTTAEV DSAVARISQK IGVPASYYQF LIPIENFVVA GGFETTVSGS FRGLGQFNRQ 130 140 150 160 170 180 TWDGLRRLGR NLPAFEEGSA QLNASLYAIG FLYLENKRAY EASFKGRVFT HEIAYLYHNQ 190 200 210 220 GAPAAEQYLT SGRLVYPKQS EAAVAAVAAA RNQHVKESWA

References

[1]	"Pleiotropic costs of niche expansion in the RNA bacteriophage phi 6." Duffy S., Turner P.E., Burch C.L. Genetics 172:751-757(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC 21781-B1 EMBL ABB69811.1.
[2]	"Greater genetic diversity among asexual, not sexual, populations of bacteriophage phi6." Dennehy J.J., O'Keefe K.J., Duffy S., Chao L., Edwards S.V., Turner P.E. Submitted (JUN-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: A1 EMBL ABI20400.1 and S1 EMBL ABI20404.1.
[3]	"Lack of canalization during adaptation of the dsRNA bacteriophage phi-6 to a distantly related host." Duffy S., Burch C.L., Turner P.E. Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: T1 EMBL ABK35433.1, T2 EMBL ABK35437.1, T4 EMBL ABK35445.1, Tom1 EMBL ABK35417.1, Tom2 EMBL ABK35421.1, Tom3 EMBL ABK35425.1 and Tom4 EMBL ABK35429.1.
[4]	"Evolutionary genomics of host-use in bifurcating demes of RNA virus phi-6." Turner P.E., McBride R.C., Duffy S., Montville R., Wang L.S., Yang Y.W., Lee S.J., Kim J. BMC Evol. Biol. 12:153-153(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Structural Evolution of an enzyme driven tradeoff between RNA virus survival and reproduction." Dessau M.A., Goldhill D., McBride R.L., Turner P.E., Modis Y. Submitted (FEB-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 48-220.
[6]	"Structural evolution of an enzyme driven tradeoff between RNA virus survival and reproduction." Dessau M.A., Goldhill D., McBride R.L., Turner P.E., Modis Y. Submitted (FEB-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.23 ANGSTROMS) OF 48-220.
[7]	"Structural evolution of an enzyme driven tradoff between RNA virus survival and reproduction." Dessau M.A., Goldhill D., McBride R.L., Turner P.E., Modis Y. Submitted (FEB-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (1.40 ANGSTROMS) OF 48-220.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

DQ201338 Genomic RNA. Translation: ABB69811.1.
DQ785287 Genomic RNA. Translation: ABI20400.1.
DQ785288 Genomic RNA. Translation: ABI20404.1.
DQ978302 Genomic RNA. Translation: ABK35417.1.
DQ978303 Genomic RNA. Translation: ABK35421.1.
DQ978304 Genomic RNA. Translation: ABK35425.1.
DQ978305 Genomic RNA. Translation: ABK35429.1.
DQ978306 Genomic RNA. Translation: ABK35433.1.
DQ978307 Genomic RNA. Translation: ABK35437.1.
DQ978309 Genomic RNA. Translation: ABK35445.1.
JX481854 Genomic RNA. Translation: AFR52907.1.
JX481857 Genomic RNA. Translation: AFR52919.1.
JX481860 Genomic RNA. Translation: AFR52931.1.
JX481861 Genomic RNA. Translation: AFR52935.1.
JX481866 Genomic RNA. Translation: AFR52955.1.
JX481867 Genomic RNA. Translation: AFR52959.1.
JX481868 Genomic RNA. Translation: AFR52963.1.
JX481869 Genomic RNA. Translation: AFR52967.1.
JX481878 Genomic RNA. Translation: AFR53003.1.
JX481879 Genomic RNA. Translation: AFR53007.1.
JX481880 Genomic RNA. Translation: AFR53011.1.
JX481882 Genomic RNA. Translation: AFR53019.1.
JX481883 Genomic RNA. Translation: AFR53023.1.
JX481885 Genomic RNA. Translation: AFR53031.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4DQ5	X-ray	1.40	A/B	48-220	[»]
4DQ7	X-ray	1.40	A/B	48-220	[»]
4DQJ	X-ray	1.23	A/B	48-220	[»]

ModBase

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Protocols and materials databases

StructuralBiologyKnowledgebase

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Family and domain databases

InterPro

IPR019505. Peptidase_U40.
[Graphical view]

Pfam

PF10464. Peptidase_U40. 1 hit.
[Graphical view]

ProtoNet

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Entry information

Entry name

Q283U5_BPPH6

Accession

Primary (citable) accession number: Q283U5

Entry history

Integrated into UniProtKB/TrEMBL:	April 4, 2006
Last sequence update:	April 4, 2006
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)