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Protein
Submitted name:

AscC

Gene

ascC

Organism
Aeromonas salmonicida (strain A449)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciASAL382245:GJJN-4605-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AscCImported
Submitted name:
AscC proteinImported
Gene namesi
Name:ascCImported
Ordered Locus Names:ASA_P5G057Imported
Encoded oniPlasmid 5Imported
Plasmid pAsa5Imported
OrganismiAeromonas salmonicida (strain A449)Imported
Taxonomic identifieri382245 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
Proteomesi
  • UP000000225 Componenti: Plasmid pAsa5

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini120 – 18061Secretin_NInterPro annotationAdd
BLAST
Domaini193 – 28593Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q27RH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METDDMAPLS VQPLLRPLLW ICLAVMAWQR PAMAQELDWV PMPYSYVAEG
60 70 80 90 100
ESLRDVLVNF GANYEVSVVV SDKVNDQVNG QFEHDEPLAF LQQLSSLYNL
110 120 130 140 150
VWYYDGNVLY VFKNSEVQSR LINLEQTGAA ELKQALQRAG IWEPRFGWRP
160 170 180 190 200
DADNRLLYVS GPPRYLELIE QTALALEQQS QLRSEKTGPL AIEIFPLKYA
210 220 230 240 250
SATDRSIQYR DTDVAAPGVA TILAKLLSDA GVQMVNGEGN KAATATSGQA
260 270 280 290 300
IVQADPSLNA VIVRDAPERM AMYGKLIAAL DKPAARIEVA LSIIDINAED
310 320 330 340 350
LSQLGVDWRV GIRTGSNQQV IIKTTGDRKG IEGGAALGSL VDSKGLDYLL
360 370 380 390 400
ARVNLLENEG NAQVVSRPTL LTQENTQAVI DHSETYYVKI SGERVAELQG
410 420 430 440 450
ITYGTMLRMT PRVIQMGDRP EISLSLHIED GNQKPNSAGA DGIPTISRTV
460 470 480 490 500
VDTIARVGHG QSLLIGGIYR DEMSENLSKV PFLGDIPYLG ALFRSKDTQT
510 520 530 540 550
RRSVRLFIIE PRLIDDGIAH YLALGNGQDL RAGVLGADEI SNQSLSLGKV
560 570 580 590 600
LGGAQCQPLA AARDVQQLLR QGGKSSSLTQ CRMGNELGWR LVEMNKDQKC
610
TPAASWCVQA GNEGATR
Length:617
Mass (Da):67,405
Last modified:July 11, 2006 - v1
Checksum:iE0A29ADBF9E4BA6B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ386863 Genomic DNA. Translation: ABD48952.1.
CP000646 Genomic DNA. Translation: ABO92531.1.

Genome annotation databases

EnsemblBacteriaiABO92531; ABO92531; ASA_P5G057.
KEGGiasa:ASA_P5G057.
PATRICi20795567. VBIAerSal2987_4510.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ386863 Genomic DNA. Translation: ABD48952.1.
CP000646 Genomic DNA. Translation: ABO92531.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABO92531; ABO92531; ASA_P5G057.
KEGGiasa:ASA_P5G057.
PATRICi20795567. VBIAerSal2987_4510.

Phylogenomic databases

HOGENOMiHOG000219614.
KOiK03219.
OMAiYLMARIS.
OrthoDBiEOG6423BN.

Enzyme and pathway databases

BioCyciASAL382245:GJJN-4605-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Contribution of the type III secretion system (TTSS) to virulence of Aeromonas salmonicida subsp. salmonicida."
    Dacanay A., Knickle L., Solanky K.S., Boyd J.M., Walter J.A., Brown L.L., Johnson S.C., Reith M.
    Microbiology 152:1847-1856(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A449Imported.
  2. "The genome sequence of Aeromonas salmonicida subsp. salmonicida A449."
    Reith M.E., Singh R.K., Curtis B., Boyd J., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J., Johnson S., Brown L.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A449Imported.
    Plasmid: 5
  3. "The genome of Aeromonas salmonicida subsp. salmonicida A449: insights into the evolution of a fish pathogen."
    Reith M.E., Singh R.K., Curtis B., Boyd J.M., Bouevitch A., Kimball J., Munholland J., Murphy C., Sarty D., Williams J., Nash J.H., Johnson S.C., Brown L.L.
    BMC Genomics 9:427-427(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A449Imported.

Entry informationi

Entry nameiQ27RH9_AERS4
AccessioniPrimary (citable) accession number: Q27RH9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 11, 2006
Last sequence update: July 11, 2006
Last modified: December 9, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.