Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q27I49 (Q27I49_PIG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Suppressor of variegation 3-9-like protein 2 EMBL ABD62994.1
Submitted name:
Uncharacterized protein Ensembl ENSSSCP00000011784 Ensembl ENSSSCP00000025189
Gene names
Name:LOC100738592 Ensembl ENSSSCP00000011784 Ensembl ENSSSCP00000025189
Synonyms:Suv39h2 EMBL ABX10188.1
OrganismSus scrofa (Pig) [Reference proteome] EMBL ABD62994.1
Taxonomic identifier9823 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Suina › Suidae › Sus

Protein attributes

Sequence length350 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS007728

S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine. RuleBase RU004542

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain. RuleBase RU004538 SAAS SAAS007728

Contains 1 post-SET domain. SAAS SAAS001214

Contains 1 pre-SET domain. RuleBase RU004542

Sequences

Sequence LengthMass (Da)Tools
Q27I49 [UniParc].

Last modified April 4, 2006. Version 1.
Checksum: 841C83C1FDBE67D0

FASTA35039,889
        10         20         30         40         50         60 
MEYYLVKWKG WPDSTNTWEP LQNLKCPLLL QQFCNDKHNY LSQVKKGKAI TLKENHRALK 

        70         80         90        100        110        120 
PAIAEYIVKK AKQRIALQRW QDELNRRKNH KGMIFVENTV DLEGPPSDFY YINEYKPAPG 

       130        140        150        160        170        180 
ISLVNEATFG CSCTDCFHEK CCPAEAGVLL AYNKNQQIKI PPGTPIYECN SRCQCGPDCP 

       190        200        210        220        230        240 
NRIVQKGTQY SLCIFRTSNG CGWGVKTLVK IKRMSFVMEY VGEVITSEEA ERRGQLYDNK 

       250        260        270        280        290        300 
GITYLFDLDY ESDEFTVDAA RYGNVSHFVN HSCDPNLQVF NVFIDNLDTR LPRIALFSTR 

       310        320        330        340        350 
TINAGEELTF DYQMKGSGDI SSDSIDHSPA KKRARTVCKC GAVTCRGYLN

« Hide

References

« Hide 'large scale' references
[1]"Sus scrofa suppressor of variegation 3-9 homolog 2 (Drosophila)."
Jiang S., Peng J.
Submitted (FEB-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Cloning, characterization and prokaryotic expression of porcine suppressor of variegation 3-9 homolog 2 (Suv39h2) gene."
Liu L., Jiang S.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Porcine genome sequencing project
Submitted (NOV-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]Ensembl
Submitted (MAY-2011) to UniProtKB
Cited for: IDENTIFICATION.
[5]Ensembl
Submitted (MAY-2012) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CU929591 Genomic DNA. No translation available.
DQ400534 mRNA. Translation: ABD62994.1.
EU219913 mRNA. Translation: ABX10188.1.
RefSeqNP_001034836.1. NM_001039747.1.
UniGeneSsc.24424.

3D structure databases

SMRQ27I49. Positions 64-350.
ModBaseSearch...

Protein-protein interaction databases

STRING9823.ENSSSCP00000011784.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSSSCT00000012092; ENSSSCP00000011784; ENSSSCG00000011048.
ENSSSCT00000031746; ENSSSCP00000025189; ENSSSCG00000023928.
GeneID664651.
KEGGssc:664651.

Organism-specific databases

CTD79723.

Phylogenomic databases

GeneTreeENSGT00690000101898.
HOVERGENHBG055621.
KOK11419.
OMAPGISLVN.

Gene expression databases

ArrayExpressQ27I49.

Family and domain databases

InterProIPR023780. Chromo_domain.
IPR000953. Chromo_domain/shadow.
IPR016197. Chromodomain-like.
IPR023779. Chromodomain_CS.
IPR011381. Histone_H3-K9_MeTrfase.
IPR003616. Post-SET_dom.
IPR007728. Pre-SET_dom.
IPR001214. SET_dom.
[Graphical view]
PfamPF00385. Chromo. 1 hit.
PF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
PIRSFPIRSF009343. SUV39_SET. 1 hit.
SMARTSM00298. CHROMO. 1 hit.
SM00508. PostSET. 1 hit.
SM00317. SET. 1 hit.
[Graphical view]
SUPFAMSSF54160. Chromodomain-like. 1 hit.
PROSITEPS00598. CHROMO_1. 1 hit.
PS50013. CHROMO_2. 1 hit.
PS50868. POST_SET. 1 hit.
PS50867. PRE_SET. 1 hit.
PS51579. SAM_MT43_SUVAR39_3. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ27I49_PIG
AccessionPrimary (citable) accession number: Q27I49
Secondary accession number(s): F1RW84
Entry history
Integrated into UniProtKB/TrEMBL: April 4, 2006
Last sequence update: April 4, 2006
Last modified: May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info