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Q27515 (C13A6_CAEEL) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Putative cytochrome P450 CYP13A6

EC=1.14.-.-
Gene names
Name:cyp-13A6
Synonyms:cyp13a6
ORF Names:T10B9.3
OrganismCaenorhabditis elegans
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length518 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.

Cofactor

Heme group By similarity.

Sequence similarities

Belongs to the cytochrome P450 family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 518518Putative cytochrome P450 CYP13A6
PRO_0000052266

Sites

Metal binding4631Iron (heme axial ligand) By similarity

Sequences

Sequence LengthMass (Da)Tools
Q27515 [UniParc].

Last modified November 1, 1997. Version 1.
Checksum: 3B17B7A30E2792CA

FASTA51859,445
        10         20         30         40         50         60 
MIFVLLSAVL LGVFTYSVWI WSYFIRKGIK GPRGFPGIGM LIQTIDHENP PFLKYRDWTK 

        70         80         90        100        110        120 
QYGPVYGFTE GPQQTMIISE PEMVNEIFKK QFDNFYGRKL RPIIGDPEKD KRVNIFSTQG 

       130        140        150        160        170        180 
KRWKRLRTLS SPSFSNNSLR KVRNSVQECG TEILWNIEQK VRKNEDIDML IVYQEYTLGV 

       190        200        210        220        230        240 
ISRIALGQSE SNMFKNPLLP KVQAIFNGSW HVFLITGIFP PLAGVFRKMS KMLPASFIPA 

       250        260        270        280        290        300 
FKIFDLIEVA VQARIDQRAK DEIKGVEPGE PQDFIDLFLD ARVPDVKILS GEANEDFAKS 

       310        320        330        340        350        360 
SVVKINKELT FDEIIAQCFV FLAAGFDTTA LSLSYATYLL ATHPEIQTKL QEEVDRECPD 

       370        380        390        400        410        420 
PEIFFDHLSK LKYLECVMKE TLRLYPLGTT ANTRKCMRET TINGVNFDEG MNIQVDTWTL 

       430        440        450        460        470        480 
HHNPRIWGED VEDFKPERWE NGACEHLEHN GSYIPFGSGP RQCIGMRLAQ MEQKILLAQI 

       490        500        510 
LKEYSFRTTK NTQIPVKLVG KLTLSPESVI VKLEPRDS 

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References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed: 9851916] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
Z48717 Genomic DNA. Translation: CAA88605.1.
PIRT24779.
RefSeqNP_496113.1. NM_063712.2.
UniGeneCel.35645.

3D structure databases

ProteinModelPortalQ27515.
SMRQ27515. Positions 21-518.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ27515.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaT10B9.3; T10B9.3; T10B9.3.
GeneID188357.
KEGGcel:T10B9.3.
NMPDRfig|6239.3.peg.7041.
UCSCT10B9.3. c. elegans.

Organism-specific databases

CTD188357.
WormBaseT10B9.3; CE01657; WBGene00011673; cyp-13A6.

Phylogenomic databases

eggNOGmeNOG09107.
GeneTreeEMGT00050000001178.
HOGENOMHBG389200.
InParanoidQ27515.
OMATIDHENP.
PhylomeDBQ27515.

Gene expression databases

ArrayExpressQ27515.

Family and domain databases

InterProIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
Gene3DG3DSA:1.10.630.10. Cyt_P450. 1 hit.
KOK00517.
PfamPF00067. p450. 1 hit.
[Graphical view]
PRINTSPR00463. EP450I.
PR00385. P450.
SUPFAMSSF48264. Cytochrome_P450. 1 hit.
PROSITEPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio938502.

Entry information

Entry nameC13A6_CAEEL
AccessionPrimary (citable) accession number: Q27515
Entry history
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: November 16, 2011
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Relevant documents

Caenorhabditis elegans

Caenorhabditis elegans: entries, gene names and cross-references to WormPep

SIMILARITY comments

Index of protein domains and families