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Protein

Putative cytochrome P450 CYP13A5

Gene

cyp-13A5

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Cytochromes P450 are a group of heme-thiolate monooxygenases. They oxidize a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.

Cofactori

hemeBy similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi464 – 4641Iron (heme axial ligand)By similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Monooxygenase, Oxidoreductase

Keywords - Ligandi

Heme, Iron, Metal-binding

Enzyme and pathway databases

ReactomeiR-CEL-211979. Eicosanoids.
R-CEL-2162123. Synthesis of Prostaglandins (PG) and Thromboxanes (TX).

Names & Taxonomyi

Protein namesi
Recommended name:
Putative cytochrome P450 CYP13A5 (EC:1.14.-.-)
Gene namesi
Name:cyp-13A5
Synonyms:cyp13a5
ORF Names:T10B9.2
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome II

Organism-specific databases

WormBaseiT10B9.2; CE01656; WBGene00011672; cyp-13A5.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 520520Putative cytochrome P450 CYP13A5PRO_0000052265Add
BLAST

Proteomic databases

EPDiQ27514.
PaxDbiQ27514.
PRIDEiQ27514.

Interactioni

Protein-protein interaction databases

STRINGi6239.T10B9.2.

Structurei

3D structure databases

ProteinModelPortaliQ27514.
SMRiQ27514. Positions 30-517.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the cytochrome P450 family.Curated

Phylogenomic databases

eggNOGiKOG0158. Eukaryota.
COG2124. LUCA.
GeneTreeiENSGT00760000118816.
HOGENOMiHOG000016177.
InParanoidiQ27514.
KOiK17861.
OrthoDBiEOG7W6WKQ.
PhylomeDBiQ27514.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q27514-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLSILIAGA SFIGLLTYYI WIWSFWIRKG VKGPRGFPFF GVIHEFQDYE
60 70 80 90 100
NPGLLKLGEW TKEYGPIYGI TEGVEKTLIV SNPEFVHEVF VKQFDNFYGR
110 120 130 140 150
KTNPIQGDPN KNKRAHLVSA QGHRWKRLRT LSSPTFSNKN LRKIMSTVEE
160 170 180 190 200
TVVELMRHLD DASAKGKAVD LLDYYQEFTL DIIGRIAMGQ TESLMFRNPM
210 220 230 240 250
LPKVKGIFKD GRKLPFLVSG IFPIAGTMFR EFFMRFPSIQ PAFDIMSTVE
260 270 280 290 300
KALNKRLEQR AADEKAGIEP SGEPQDFIDL FLDARANVDF FEEESALGFA
310 320 330 340 350
KTEIAKVDKQ LTFDEIIGQL FVFLLAGYDT TALSLSYSSY LLARHPEIQK
360 370 380 390 400
KLQEEVDREC PNPEVTFDQI SKLKYMECVV KEALRMYPLA SIVHNRKCMK
410 420 430 440 450
ETNVLGVQIE KGTNVQVDTW TLHYDPKVWG EDANEFRPER WESGDELFYA
460 470 480 490 500
KGGYLPFGMG PRICIGMRLA MMEKKMLLTH ILKKYTFETS TQTEIPLKLV
510 520
GSATTAPRSV MLKLTPRHSN
Length:520
Mass (Da):59,524
Last modified:November 1, 1997 - v1
Checksum:i0B7B19E25B7ADF3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48717 Genomic DNA. Translation: CAA88604.1.
PIRiT24778.
RefSeqiNP_496112.1. NM_063711.4.
UniGeneiCel.14406.

Genome annotation databases

EnsemblMetazoaiT10B9.2; T10B9.2; WBGene00011672.
GeneIDi188356.
KEGGicel:CELE_T10B9.2.
UCSCiT10B9.2. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z48717 Genomic DNA. Translation: CAA88604.1.
PIRiT24778.
RefSeqiNP_496112.1. NM_063711.4.
UniGeneiCel.14406.

3D structure databases

ProteinModelPortaliQ27514.
SMRiQ27514. Positions 30-517.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.T10B9.2.

Proteomic databases

EPDiQ27514.
PaxDbiQ27514.
PRIDEiQ27514.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiT10B9.2; T10B9.2; WBGene00011672.
GeneIDi188356.
KEGGicel:CELE_T10B9.2.
UCSCiT10B9.2. c. elegans.

Organism-specific databases

CTDi188356.
WormBaseiT10B9.2; CE01656; WBGene00011672; cyp-13A5.

Phylogenomic databases

eggNOGiKOG0158. Eukaryota.
COG2124. LUCA.
GeneTreeiENSGT00760000118816.
HOGENOMiHOG000016177.
InParanoidiQ27514.
KOiK17861.
OrthoDBiEOG7W6WKQ.
PhylomeDBiQ27514.

Enzyme and pathway databases

ReactomeiR-CEL-211979. Eicosanoids.
R-CEL-2162123. Synthesis of Prostaglandins (PG) and Thromboxanes (TX).

Miscellaneous databases

PROiQ27514.

Family and domain databases

Gene3Di1.10.630.10. 1 hit.
InterProiIPR001128. Cyt_P450.
IPR017972. Cyt_P450_CS.
IPR002401. Cyt_P450_E_grp-I.
[Graphical view]
PfamiPF00067. p450. 1 hit.
[Graphical view]
PRINTSiPR00463. EP450I.
PR00385. P450.
SUPFAMiSSF48264. SSF48264. 1 hit.
PROSITEiPS00086. CYTOCHROME_P450. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiC13A5_CAEEL
AccessioniPrimary (citable) accession number: Q27514
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 1, 1997
Last modified: June 8, 2016
This is version 101 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.