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Q27428

- Q27428_CHLNI

UniProt

Q27428 - Q27428_CHLNI

Protein
Submitted name:

Troponin C

Gene
N/A
Organism
Chlamys nipponensis akazara (Akazara scallop) (Japanese scallop)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi132 – 1321CalciumImported
    Metal bindingi134 – 1341CalciumImported
    Metal bindingi136 – 1361CalciumImported
    Metal bindingi138 – 1381Calcium; via carbonyl oxygenImported
    Metal bindingi143 – 1431CalciumImported

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotationImported, Metal-bindingImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Troponin CImported
    OrganismiChlamys nipponensis akazara (Akazara scallop) (Japanese scallop)Imported
    Taxonomic identifieri6571 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaBivalviaPteriomorphiaPectinoidaPectinoideaPectinidaeChlamys

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    3TZ1X-ray1.80A81-153[»]
    ProteinModelPortaliQ27428.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    Gene3Di1.10.238.10. 2 hits.
    InterProiIPR011992. EF-hand-dom_pair.
    IPR018247. EF_Hand_1_Ca_BS.
    IPR002048. EF_hand_dom.
    [Graphical view]
    PfamiPF00036. EF-hand_1. 1 hit.
    PF13405. EF-hand_6. 1 hit.
    [Graphical view]
    SMARTiSM00054. EFh. 3 hits.
    [Graphical view]
    PROSITEiPS00018. EF_HAND_1. 1 hit.
    PS50222. EF_HAND_2. 4 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q27428-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSDEFRATEK QISDAKQAFC NFDKKKEGTV SCKDLGAIFK SLGLVMKDDK    50
    IKDWSDEVDE EATGRLSCEQ WLKLFEWKLK EDLDERELKE AFRVLDKEKK 100
    GVIKVDVLRW ILKSLGDELT EDEIENMIAE TDTDGSGTVD YEEFKCLMMS 150
    SDA 153
    Length:153
    Mass (Da):17,637
    Last modified:November 1, 1996 - v1
    Checksum:i4F4615B2E2BE9D13
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D85883 mRNA. Translation: BAA12908.1.
    PIRiS45681.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    D85883 mRNA. Translation: BAA12908.1 .
    PIRi S45681.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    3TZ1 X-ray 1.80 A 81-153 [» ]
    ProteinModelPortali Q27428.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 1.10.238.10. 2 hits.
    InterProi IPR011992. EF-hand-dom_pair.
    IPR018247. EF_Hand_1_Ca_BS.
    IPR002048. EF_hand_dom.
    [Graphical view ]
    Pfami PF00036. EF-hand_1. 1 hit.
    PF13405. EF-hand_6. 1 hit.
    [Graphical view ]
    SMARTi SM00054. EFh. 3 hits.
    [Graphical view ]
    PROSITEi PS00018. EF_HAND_1. 1 hit.
    PS50222. EF_HAND_2. 4 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Cloning and sequence of a cDNA encoding Akazara scallop troponin C."
      Ojima T., Tanaka H., Nishita K.
      Arch. Biochem. Biophys. 311:272-276(1994) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Striated adductor muscleImported.
    2. Ojima T.
      Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Tissue: Striated adductor muscleImported.
    3. "Structure of the Ca(2+)-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment."
      Kato Y.S., Yumoto F., Tanaka H., Miyakawa T., Miyauchi Y., Takeshita D., Sawano Y., Ojima T., Ohtsuki I., Tanokura M.
      Biol. Chem. 394:55-68(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 81-153 IN COMPLEX WITH CALCIUM.

    Entry informationi

    Entry nameiQ27428_CHLNI
    AccessioniPrimary (citable) accession number: Q27428
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 1, 1996
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported

    External Data

    Dasty 3