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Q27428

- Q27428_CHLNI

UniProt

Q27428 - Q27428_CHLNI

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Protein
Submitted name:

Troponin C

Gene
N/A
Organism
Chlamys nipponensis akazara (Akazara scallop) (Japanese scallop)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi132 – 1321CalciumImported
Metal bindingi134 – 1341CalciumImported
Metal bindingi136 – 1361CalciumImported
Metal bindingi138 – 1381Calcium; via carbonyl oxygenImported
Metal bindingi143 – 1431CalciumImported

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotationImported, Metal-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
Troponin CImported
OrganismiChlamys nipponensis akazara (Akazara scallop) (Japanese scallop)Imported
Taxonomic identifieri6571 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaBivalviaPteriomorphiaPectinoidaPectinoideaPectinidaeChlamys

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TZ1X-ray1.80A81-153[»]
ProteinModelPortaliQ27428.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF00036. EF-hand_1. 1 hit.
PF13405. EF-hand_6. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
PROSITEiPS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q27428-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSDEFRATEK QISDAKQAFC NFDKKKEGTV SCKDLGAIFK SLGLVMKDDK
60 70 80 90 100
IKDWSDEVDE EATGRLSCEQ WLKLFEWKLK EDLDERELKE AFRVLDKEKK
110 120 130 140 150
GVIKVDVLRW ILKSLGDELT EDEIENMIAE TDTDGSGTVD YEEFKCLMMS

SDA
Length:153
Mass (Da):17,637
Last modified:November 1, 1996 - v1
Checksum:i4F4615B2E2BE9D13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85883 mRNA. Translation: BAA12908.1.
PIRiS45681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D85883 mRNA. Translation: BAA12908.1 .
PIRi S45681.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3TZ1 X-ray 1.80 A 81-153 [» ]
ProteinModelPortali Q27428.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 1.10.238.10. 2 hits.
InterProi IPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view ]
Pfami PF00036. EF-hand_1. 1 hit.
PF13405. EF-hand_6. 1 hit.
[Graphical view ]
SMARTi SM00054. EFh. 3 hits.
[Graphical view ]
PROSITEi PS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning and sequence of a cDNA encoding Akazara scallop troponin C."
    Ojima T., Tanaka H., Nishita K.
    Arch. Biochem. Biophys. 311:272-276(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Striated adductor muscleImported.
  2. Ojima T.
    Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Striated adductor muscleImported.
  3. "Structure of the Ca(2+)-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment."
    Kato Y.S., Yumoto F., Tanaka H., Miyakawa T., Miyauchi Y., Takeshita D., Sawano Y., Ojima T., Ohtsuki I., Tanokura M.
    Biol. Chem. 394:55-68(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 81-153 IN COMPLEX WITH CALCIUM.

Entry informationi

Entry nameiQ27428_CHLNI
AccessioniPrimary (citable) accession number: Q27428
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: October 29, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3