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Q27428 (Q27428_CHLNI) Unreviewed, UniProtKB/TrEMBL

Last modified December 11, 2013. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length153 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   LigandCalcium RuleBase RU000331 PDB 3TZ1
Metal-binding PDB 3TZ1
   Technical term3D-structure PDB 3TZ1
Gene Ontology (GO)
   Molecular_functioncalcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding1321Calcium PDB 3TZ1
Metal binding1341Calcium PDB 3TZ1
Metal binding1361Calcium PDB 3TZ1
Metal binding1381Calcium; via carbonyl oxygen PDB 3TZ1
Metal binding1431Calcium PDB 3TZ1

Sequences

Sequence LengthMass (Da)Tools
Q27428 [UniParc].

Last modified November 1, 1996. Version 1.
Checksum: 4F4615B2E2BE9D13

FASTA15317,637
        10         20         30         40         50         60 
MSDEFRATEK QISDAKQAFC NFDKKKEGTV SCKDLGAIFK SLGLVMKDDK IKDWSDEVDE 

        70         80         90        100        110        120 
EATGRLSCEQ WLKLFEWKLK EDLDERELKE AFRVLDKEKK GVIKVDVLRW ILKSLGDELT 

       130        140        150 
EDEIENMIAE TDTDGSGTVD YEEFKCLMMS SDA 

« Hide

References

[1]"Cloning and sequence of a cDNA encoding Akazara scallop troponin C."
Ojima T., Tanaka H., Nishita K.
Arch. Biochem. Biophys. 311:272-276(1994) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Striated adductor muscle EMBL BAA12908.1.
[2]Ojima T.
Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Striated adductor muscle EMBL BAA12908.1.
[3]"Structure of the Ca(2+)-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment."
Kato Y.S., Yumoto F., Tanaka H., Miyakawa T., Miyauchi Y., Takeshita D., Sawano Y., Ojima T., Ohtsuki I., Tanokura M.
Biol. Chem. 394:55-68(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 81-153 IN COMPLEX WITH CALCIUM.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
D85883 mRNA. Translation: BAA12908.1.
PIRS45681.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3TZ1X-ray1.80A81-153[»]
ProteinModelPortalQ27428.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.238.10. 2 hits.
InterProIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamPF00036. EF-hand_1. 1 hit.
PF13405. EF-hand_6. 1 hit.
[Graphical view]
SMARTSM00054. EFh. 3 hits.
[Graphical view]
PROSITEPS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ27428_CHLNI
AccessionPrimary (citable) accession number: Q27428
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: December 11, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)