SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q27428

- Q27428_CHLNI

UniProt

Q27428 - Q27428_CHLNI

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Troponin C
Gene
N/A
Organism
Chlamys nipponensis akazara (Akazara scallop) (Japanese scallop)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi132 – 1321CalciumImported
Metal bindingi134 – 1341CalciumImported
Metal bindingi136 – 1361CalciumImported
Metal bindingi138 – 1381Calcium; via carbonyl oxygenImported
Metal bindingi143 – 1431CalciumImported

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotationImported, Metal-bindingImported

Names & Taxonomyi

Protein namesi
Submitted name:
Troponin CImported
OrganismiChlamys nipponensis akazara (Akazara scallop) (Japanese scallop)Imported
Taxonomic identifieri6571 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaBivalviaPteriomorphiaPectinoidaPectinoideaPectinidaeChlamys

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
3TZ1X-ray1.80A81-153[»]
ProteinModelPortaliQ27428.

Family & Domainsi

Family and domain databases

Gene3Di1.10.238.10. 2 hits.
InterProiIPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]
PfamiPF00036. EF-hand_1. 1 hit.
PF13405. EF-hand_6. 1 hit.
[Graphical view]
SMARTiSM00054. EFh. 3 hits.
[Graphical view]
PROSITEiPS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q27428-1 [UniParc]FASTAAdd to Basket

« Hide

MSDEFRATEK QISDAKQAFC NFDKKKEGTV SCKDLGAIFK SLGLVMKDDK    50
IKDWSDEVDE EATGRLSCEQ WLKLFEWKLK EDLDERELKE AFRVLDKEKK 100
GVIKVDVLRW ILKSLGDELT EDEIENMIAE TDTDGSGTVD YEEFKCLMMS 150
SDA 153
Length:153
Mass (Da):17,637
Last modified:November 1, 1996 - v1
Checksum:i4F4615B2E2BE9D13
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D85883 mRNA. Translation: BAA12908.1.
PIRiS45681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
D85883 mRNA. Translation: BAA12908.1 .
PIRi S45681.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
3TZ1 X-ray 1.80 A 81-153 [» ]
ProteinModelPortali Q27428.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Family and domain databases

Gene3Di 1.10.238.10. 2 hits.
InterProi IPR011992. EF-hand-dom_pair.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view ]
Pfami PF00036. EF-hand_1. 1 hit.
PF13405. EF-hand_6. 1 hit.
[Graphical view ]
SMARTi SM00054. EFh. 3 hits.
[Graphical view ]
PROSITEi PS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Cloning and sequence of a cDNA encoding Akazara scallop troponin C."
    Ojima T., Tanaka H., Nishita K.
    Arch. Biochem. Biophys. 311:272-276(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Striated adductor muscleImported.
  2. Ojima T.
    Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Striated adductor muscleImported.
  3. "Structure of the Ca(2+)-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment."
    Kato Y.S., Yumoto F., Tanaka H., Miyakawa T., Miyauchi Y., Takeshita D., Sawano Y., Ojima T., Ohtsuki I., Tanokura M.
    Biol. Chem. 394:55-68(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 81-153 IN COMPLEX WITH CALCIUM.

Entry informationi

Entry nameiQ27428_CHLNI
AccessioniPrimary (citable) accession number: Q27428
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 11, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported

External Data

Dasty 3

Similar proteinsi