Q27428 (Q27428_CHLNI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Troponin C EMBL BAA12908.1
Organism	Chlamys nipponensis akazara (Akazara scallop) (Japanese scallop) EMBL BAA12908.1
Taxonomic identifier	6571 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Lophotrochozoa › Mollusca › Bivalvia › Pteriomorphia › Pectinoida › Pectinoidea › Pectinidae › Chlamys › Chlamys nipponensis

Protein attributes

Sequence length	153 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Ligand	Calcium RuleBase RU000331
Technical term	3D-structure PDB 3TZ1
Gene Ontology (GO)
Molecular_function	calcium ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q27428 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: 4F4615B2E2BE9D13	FASTA	153	17,637
	10 20 30 40 50 60 MSDEFRATEK QISDAKQAFC NFDKKKEGTV SCKDLGAIFK SLGLVMKDDK IKDWSDEVDE 70 80 90 100 110 120 EATGRLSCEQ WLKLFEWKLK EDLDERELKE AFRVLDKEKK GVIKVDVLRW ILKSLGDELT 130 140 150 EDEIENMIAE TDTDGSGTVD YEEFKCLMMS SDA

References

[1]	"Cloning and sequence of a cDNA encoding Akazara scallop troponin C." Ojima T., Tanaka H., Nishita K. Arch. Biochem. Biophys. 311:272-276(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Striated adductor muscle EMBL BAA12908.1.
[2]	Ojima T. Submitted (JUN-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Striated adductor muscle EMBL BAA12908.1.
[3]	"Structure of the Ca(2+)-saturated C-terminal domain of scallop troponin C in complex with a troponin I fragment." Kato Y.S., Yumoto F., Tanaka H., Miyakawa T., Miyauchi Y., Takeshita D., Sawano Y., Ojima T., Ohtsuki I., Tanokura M. Biol. Chem. 394:55-68(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 81-153.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

D85883 mRNA. Translation: BAA12908.1.

PIR

S45681.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
3TZ1	X-ray	1.80	A	81-153	[»]

HSSP

HSSP built from PDB template 1N0Y based on UniProtKB P07463.

ProteinModelPortal

Q27428.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

Gene3D

1.10.238.10. 2 hits.

InterPro

IPR011992. EF-hand-like_dom.
IPR018247. EF_Hand_1_Ca_BS.
IPR002048. EF_hand_dom.
[Graphical view]

Pfam

PF13405. EF_hand_4. 1 hit.
PF00036. efhand. 1 hit.
[Graphical view]

SMART

SM00054. EFh. 3 hits.
[Graphical view]

PROSITE

PS00018. EF_HAND_1. 1 hit.
PS50222. EF_HAND_2. 4 hits.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q27428_CHLNI

Accession

Primary (citable) accession number: Q27428

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1996
Last sequence update:	November 1, 1996
Last modified:	May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)