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Q27302

- GLBH_CAEBR

UniProt

Q27302 - GLBH_CAEBR

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Protein
Globin-like protein
Gene
glb-1, cbg-1, glo, CBG06867
Organism
Caenorhabditis briggsae
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

May be a globin and may play a role in oxygen transport By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi101 – 1011Iron (heme proximal ligand) By similarity

GO - Molecular functioni

  1. heme binding Source: InterPro
  2. iron ion binding Source: InterPro
  3. oxygen binding Source: InterPro
  4. oxygen transporter activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Oxygen transport, Transport

Keywords - Ligandi

Heme, Iron, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Globin-like protein
Gene namesi
Name:glb-1
Synonyms:cbg-1, glo
ORF Names:CBG06867
OrganismiCaenorhabditis briggsae
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000008549: Chromosome III, UP000008549: Unassembled WGS sequence

Organism-specific databases

WormBaseiCBG06867; CBP07494; WBGene00000312; Cbr-glb-1.

Subcellular locationi

Cytoplasm Reviewed prediction

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Globin-like protein
PRO_0000052462Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG06867.

Structurei

3D structure databases

ProteinModelPortaliQ27302.

Family & Domainsi

Sequence similaritiesi

Belongs to the globin family.

Phylogenomic databases

eggNOGiNOG237047.
HOGENOMiHOG000112731.
OMAiDPALWMA.
OrthoDBiEOG7RNK4G.

Family and domain databases

Gene3Di1.10.490.10. 1 hit.
InterProiIPR000971. Globin.
IPR009050. Globin-like.
IPR012292. Globin_dom.
IPR012085. Globin_nematode.
[Graphical view]
PfamiPF00042. Globin. 1 hit.
[Graphical view]
PIRSFiPIRSF002026. Nematode_globin. 1 hit.
SUPFAMiSSF46458. SSF46458. 1 hit.

Sequencei

Sequence statusi: Complete.

Q27302-1 [UniParc]FASTAAdd to Basket

« Hide

MSMTRQEIQD LCVKSLEEKM VGTTDKGIAN GNGFYQYFFT NFPDLRVYFK    50
GAEKFTAEDV KKSERFDKQG QRILLACHLI ANVFTNEEVF KAYVRETINR 100
HRIYKMDPAL WMAFFTVFTG YLESTGSLND QQKAAWMALG KEFNAECQVH 150
LKNSNLPYVH 160
Length:160
Mass (Da):18,591
Last modified:November 1, 1996 - v1
Checksum:iAA301137614D2FA0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U48291, U48290 Genomic DNA. Translation: AAA89169.1.
U48289 mRNA. Translation: AAA89168.1.
HE601347 Genomic DNA. Translation: CAP27100.1.
RefSeqiXP_002642457.1. XM_002642411.1.

Genome annotation databases

EnsemblMetazoaiCBG06867; CBG06867; CBG06867.
GeneIDi8584451.
KEGGicbr:CBG06867.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U48291 , U48290 Genomic DNA. Translation: AAA89169.1 .
U48289 mRNA. Translation: AAA89168.1 .
HE601347 Genomic DNA. Translation: CAP27100.1 .
RefSeqi XP_002642457.1. XM_002642411.1.

3D structure databases

ProteinModelPortali Q27302.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 6238.CBG06867.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai CBG06867 ; CBG06867 ; CBG06867 .
GeneIDi 8584451.
KEGGi cbr:CBG06867.

Organism-specific databases

CTDi 8584451.
WormBasei CBG06867 ; CBP07494 ; WBGene00000312 ; Cbr-glb-1.

Phylogenomic databases

eggNOGi NOG237047.
HOGENOMi HOG000112731.
OMAi DPALWMA.
OrthoDBi EOG7RNK4G.

Family and domain databases

Gene3Di 1.10.490.10. 1 hit.
InterProi IPR000971. Globin.
IPR009050. Globin-like.
IPR012292. Globin_dom.
IPR012085. Globin_nematode.
[Graphical view ]
Pfami PF00042. Globin. 1 hit.
[Graphical view ]
PIRSFi PIRSF002026. Nematode_globin. 1 hit.
SUPFAMi SSF46458. SSF46458. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Kloek A.P., Goldberg D.E.
    Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AF16.

Entry informationi

Entry nameiGLBH_CAEBR
AccessioniPrimary (citable) accession number: Q27302
Secondary accession number(s): A8X390
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 27, 2005
Last sequence update: November 1, 1996
Last modified: May 14, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Caution

It is uncertain whether Met-1 or Met-3 is the initiator.

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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