Q27302 (GLBH_CAEBR) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Globin-like protein

Gene names

Name:	glb-1
Synonyms:	cbg-1, glo
ORF Names:	CBG06867

Organism

Caenorhabditis briggsae [Reference proteome]

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	160 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	May be a globin and may play a role in oxygen transport By similarity.
Subcellular location	Cytoplasm Potential.
Sequence similarities	Belongs to the globin family.
Caution	It is uncertain whether Met-1 or Met-3 is the initiator.

Ontologies

Keywords
Biological process	Oxygen transport Transport
Cellular component	Cytoplasm
Ligand	Heme Iron Metal-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	heme binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro oxygen binding Inferred from electronic annotation. Source: InterPro oxygen transporter activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 160	160	Globin-like protein		PRO_0000052462
Sites
	Metal binding	101	1	Iron (heme proximal ligand) By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q27302 [UniParc]. Last modified November 1, 1996. Version 1. Checksum: AA301137614D2FA0	FASTA	160	18,591
	10 20 30 40 50 60 MSMTRQEIQD LCVKSLEEKM VGTTDKGIAN GNGFYQYFFT NFPDLRVYFK GAEKFTAEDV 70 80 90 100 110 120 KKSERFDKQG QRILLACHLI ANVFTNEEVF KAYVRETINR HRIYKMDPAL WMAFFTVFTG 130 140 150 160 YLESTGSLND QQKAAWMALG KEFNAECQVH LKNSNLPYVH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Kloek A.P., Goldberg D.E. Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
[2]	"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U48291, U48290 Genomic DNA. Translation: AAA89169.1. U48289 mRNA. Translation: AAA89168.1. HE601347 Genomic DNA. Translation: CAP27100.1.
RefSeq	XP_002642457.1. XM_002642411.1.
3D structure databases
ProteinModelPortal	Q27302.
ModBase	Search...
Protein-protein interaction databases
STRING	6238.CBG06867.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	CBG06867; CBG06867; CBG06867.
GeneID	8584451.
KEGG	cbr:CBG06867.
Organism-specific databases
CTD	8584451.
WormBase	CBG06867; CBP07494; WBGene00000312; Cbr-glb-1.
Phylogenomic databases
eggNOG	NOG237047.
HOGENOM	HOG000112731.
OMA	QRILLAC.
Family and domain databases
Gene3D	1.10.490.10. 1 hit.
InterPro	IPR000971. Globin. IPR009050. Globin-like. IPR012292. Globin_dom. IPR012085. Globin_nematode. [Graphical view]
Pfam	PF00042. Globin. 1 hit. [Graphical view]
PIRSF	PIRSF002026. Nematode_globin. 1 hit.
SUPFAM	SSF46458. Globin_like. 1 hit.
PROSITE	PS01033. GLOBIN. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

GLBH_CAEBR

Accession

Primary (citable) accession number: Q27302
Secondary accession number(s): A8X390

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 27, 2005
Last sequence update:	November 1, 1996
Last modified:	April 3, 2013
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Caenorhabditis annotation project