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Q27302

- GLBH_CAEBR

UniProt

Q27302 - GLBH_CAEBR

Protein

Globin-like protein

Gene

glb-1

Organism
Caenorhabditis briggsae
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    May be a globin and may play a role in oxygen transport.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi101 – 1011Iron (heme proximal ligand)By similarity

    GO - Molecular functioni

    1. heme binding Source: InterPro
    2. iron ion binding Source: InterPro
    3. oxygen binding Source: InterPro
    4. oxygen transporter activity Source: UniProtKB-KW

    Keywords - Biological processi

    Oxygen transport, Transport

    Keywords - Ligandi

    Heme, Iron, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Globin-like protein
    Gene namesi
    Name:glb-1
    Synonyms:cbg-1, glo
    ORF Names:CBG06867
    OrganismiCaenorhabditis briggsae
    Taxonomic identifieri6238 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000008549: Chromosome III, UP000008549: Unassembled WGS sequence

    Organism-specific databases

    WormBaseiCBG06867; CBP07494; WBGene00000312; Cbr-glb-1.

    Subcellular locationi

    Cytoplasm Curated

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 160160Globin-like proteinPRO_0000052462Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi6238.CBG06867.

    Structurei

    3D structure databases

    ProteinModelPortaliQ27302.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the globin family.Curated

    Phylogenomic databases

    eggNOGiNOG237047.
    HOGENOMiHOG000112731.
    OMAiDPALWMA.
    OrthoDBiEOG7RNK4G.

    Family and domain databases

    Gene3Di1.10.490.10. 1 hit.
    InterProiIPR000971. Globin.
    IPR009050. Globin-like.
    IPR012292. Globin_dom.
    IPR012085. Globin_nematode.
    [Graphical view]
    PfamiPF00042. Globin. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002026. Nematode_globin. 1 hit.
    SUPFAMiSSF46458. SSF46458. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q27302-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSMTRQEIQD LCVKSLEEKM VGTTDKGIAN GNGFYQYFFT NFPDLRVYFK    50
    GAEKFTAEDV KKSERFDKQG QRILLACHLI ANVFTNEEVF KAYVRETINR 100
    HRIYKMDPAL WMAFFTVFTG YLESTGSLND QQKAAWMALG KEFNAECQVH 150
    LKNSNLPYVH 160
    Length:160
    Mass (Da):18,591
    Last modified:November 1, 1996 - v1
    Checksum:iAA301137614D2FA0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U48291, U48290 Genomic DNA. Translation: AAA89169.1.
    U48289 mRNA. Translation: AAA89168.1.
    HE601347 Genomic DNA. Translation: CAP27100.1.
    RefSeqiXP_002642457.1. XM_002642411.1.

    Genome annotation databases

    EnsemblMetazoaiCBG06867; CBG06867; CBG06867.
    GeneIDi8584451.
    KEGGicbr:CBG06867.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U48291 , U48290 Genomic DNA. Translation: AAA89169.1 .
    U48289 mRNA. Translation: AAA89168.1 .
    HE601347 Genomic DNA. Translation: CAP27100.1 .
    RefSeqi XP_002642457.1. XM_002642411.1.

    3D structure databases

    ProteinModelPortali Q27302.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 6238.CBG06867.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai CBG06867 ; CBG06867 ; CBG06867 .
    GeneIDi 8584451.
    KEGGi cbr:CBG06867.

    Organism-specific databases

    CTDi 8584451.
    WormBasei CBG06867 ; CBP07494 ; WBGene00000312 ; Cbr-glb-1.

    Phylogenomic databases

    eggNOGi NOG237047.
    HOGENOMi HOG000112731.
    OMAi DPALWMA.
    OrthoDBi EOG7RNK4G.

    Family and domain databases

    Gene3Di 1.10.490.10. 1 hit.
    InterProi IPR000971. Globin.
    IPR009050. Globin-like.
    IPR012292. Globin_dom.
    IPR012085. Globin_nematode.
    [Graphical view ]
    Pfami PF00042. Globin. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002026. Nematode_globin. 1 hit.
    SUPFAMi SSF46458. SSF46458. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Kloek A.P., Goldberg D.E.
      Submitted (FEB-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA].
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AF16.

    Entry informationi

    Entry nameiGLBH_CAEBR
    AccessioniPrimary (citable) accession number: Q27302
    Secondary accession number(s): A8X390
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 27, 2005
    Last sequence update: November 1, 1996
    Last modified: October 1, 2014
    This is version 78 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programCaenorhabditis annotation project

    Miscellaneousi

    Caution

    It is uncertain whether Met-1 or Met-3 is the initiator.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3