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Q27172

- T1F_PARTE

UniProt

Q27172 - T1F_PARTE

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Protein

Trichocyst matrix protein T1-F

Gene

T1F

Organism
Paramecium tetraurelia
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

Structural protein that crystallize inside the trichocyst matrix.

Names & Taxonomyi

Protein namesi
Recommended name:
Trichocyst matrix protein T1-F
Alternative name(s):
Secretory granule protein T1-F
TMP 1-F
Cleaved into the following 2 chains:
Gene namesi
Name:T1F
ORF Names:GSPATT00027878001
OrganismiParamecium tetraurelia
Taxonomic identifieri5888 [NCBI]
Taxonomic lineageiEukaryotaAlveolataCiliophoraIntramacronucleataOligohymenophoreaPeniculidaParameciidaeParamecium
ProteomesiUP000000600: Partially assembled WGS sequence

Subcellular locationi

Trichocyst
Note: These are architecturally complex secretory storage granules-docked at the plasma membrane, ready to rapidly respond to an exocytotic stimulus.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1616Sequence AnalysisAdd
BLAST
Propeptidei17 – 5539By similarityPRO_0000307839Add
BLAST
Chaini56 – 189134Trichocyst matrix protein T1-F 1PRO_0000307840Add
BLAST
Propeptidei190 – 22536By similarityPRO_0000307841Add
BLAST
Chaini226 – 368143Trichocyst matrix protein T1-F 2PRO_0000221507Add
BLAST

Family & Domainsi

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili56 – 15398Sequence AnalysisAdd
BLAST
Coiled coili257 – 35498Sequence AnalysisAdd
BLAST

Sequence similaritiesi

Belongs to the TMP family.Curated

Keywords - Domaini

Coiled coil, Signal

Phylogenomic databases

InParanoidiQ27172.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q27172-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFKVAVCALL VLASTAINVQ SSIWTSKDQK AFAQIHQSGW GKFILNFAEL
60 70 80 90 100
HLTTGGILSE LNSEIEKLIG EMEEELAGVH HEFNRRTDVH NREVARLEQE
110 120 130 140 150
IQDKERELFN AHDFYDNVLI PQGERFAAQL EQLQENIAHN RQTLEQATVQ
160 170 180 190 200
RANDHETFES EVVEHNDAIS AIDECLQLLS TIAAPSLAEV KKVQKNLAKI
210 220 230 240 250
QNSLKKHNQF QIFVKVLLEI TVDSNFADQG ALRDIIVAFN NLRVELVDSL
260 270 280 290 300
NQITADEAEQ VADYNAQVIA LNQEHAEFQR AVVVKNAEIE ANTTKQEQTL
310 320 330 340 350
DLIDELDEDL ATLNGQLQAE NDDYAFATDV YNATVAEYNK EINAANQALD
360
LLNQPRFQDY VKSQLKGA
Length:368
Mass (Da):41,481
Last modified:October 23, 2007 - v2
Checksum:i90DCDD3240141F06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT867988 Genomic DNA. Translation: CAK56846.1.
U27508 Genomic DNA. Translation: AAA92608.1.
RefSeqiXP_001424244.1. XM_001424207.1.
UniGeneiPte.18501.

Genome annotation databases

EnsemblProtistsiCAK56846; CAK56846; GSPATT00027878001.
GeneIDi5010028.
KEGGiptm:GSPATT00027878001.

Cross-referencesi

Web resourcesi

Protein Spotlight

The arsenal of Paramecium - Issue 3 of October 2000

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CT867988 Genomic DNA. Translation: CAK56846.1 .
U27508 Genomic DNA. Translation: AAA92608.1 .
RefSeqi XP_001424244.1. XM_001424207.1.
UniGenei Pte.18501.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblProtistsi CAK56846 ; CAK56846 ; GSPATT00027878001 .
GeneIDi 5010028.
KEGGi ptm:GSPATT00027878001.

Phylogenomic databases

InParanoidi Q27172.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Stock d4-2.
  2. "A large multigene family codes for the polypeptides of the crystalline trichocyst matrix in Paramecium."
    Madeddu L., Gautier M.-C., Vayssie L., Houari A., Sperling L.
    Mol. Biol. Cell 6:649-659(1995) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 226-258.
    Strain: Stock d4-2.
  3. "Protein processing and morphogenesis of secretory granules in Paramecium."
    Madeddu L., Gautier M.-C., le Caer J.-P., de Loubresse N., Sperling L.
    Biochimie 76:329-335(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PARTIAL PROTEIN SEQUENCE.
    Strain: Stock d4-2.

Entry informationi

Entry nameiT1F_PARTE
AccessioniPrimary (citable) accession number: Q27172
Secondary accession number(s): A0BE79
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 15, 1999
Last sequence update: October 23, 2007
Last modified: October 29, 2014
This is version 56 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Protein Spotlight
    Protein Spotlight articles and cited UniProtKB/Swiss-Prot entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3