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Protein

WD repeat-containing protein SL1-17

Gene
N/A
Organism
Schistosoma mansoni (Blood fluke)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
WD repeat-containing protein SL1-17
OrganismiSchistosoma mansoni (Blood fluke)
Taxonomic identifieri6183 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 301301WD repeat-containing protein SL1-17PRO_0000051462Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi6183.Smp_049520__mRNA.

Structurei

3D structure databases

ProteinModelPortaliQ26544.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati11 – 5444WD 1Add
BLAST
Repeati59 – 9840WD 2Add
BLAST
Repeati101 – 14040WD 3Add
BLAST
Repeati143 – 18240WD 4Add
BLAST
Repeati184 – 22340WD 5Add
BLAST
Repeati227 – 26640WD 6Add
BLAST
Repeati269 – 30032WD 7Add
BLAST

Sequence similaritiesi

Contains 7 WD repeats.PROSITE-ProRule annotation

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiKOG4155. Eukaryota.
ENOG410XP1Z. LUCA.
HOGENOMiHOG000036765.
OrthoDBiEOG091G0F6P.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q26544-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYSTKCIQKQ AHKEGIWCCT WGENRNRNKQ YIITGSLDNG LIAWEWTNSQ
60 70 80 90 100
LKCLYQFEGH RLGVISVDIN STGTLAASSS LDSQILLWDL ETGRLTKTYD
110 120 130 140 150
GDPADTWTIA FSPDSRFLAT GSHTGCVNMI NVQTAQKEGS IQLEGKFVYX
160 170 180 190 200
LAYISDGSKL AAGTINGLVS ICDLETGSVQ FLDGHATPVR SVSFSPDGRL
210 220 230 240 250
LASASDDKQI KVFDVRDGRL VIPSLNGHKG WVVSVDFASD NRHLVTASTD
260 270 280 290 300
CSVRIWDLAS KEEKHCFNTH EDQVWCARYS PQGNNIISVG DDRSIMIYQC

A
Length:301
Mass (Da):33,240
Last modified:November 1, 1996 - v1
Checksum:i1845672AC9C8A3E8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30261 mRNA. Translation: AAC46896.1.

Genome annotation databases

GeneDBiSmp_049520.1:pep.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U30261 mRNA. Translation: AAC46896.1.

3D structure databases

ProteinModelPortaliQ26544.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6183.Smp_049520__mRNA.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneDBiSmp_049520.1:pep.

Phylogenomic databases

eggNOGiKOG4155. Eukaryota.
ENOG410XP1Z. LUCA.
HOGENOMiHOG000036765.
OrthoDBiEOG091G0F6P.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR020472. G-protein_beta_WD-40_rep.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 5 hits.
[Graphical view]
PRINTSiPR00320. GPROTEINBRPT.
SMARTiSM00320. WD40. 7 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 2 hits.
PS50082. WD_REPEATS_2. 4 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiWSL17_SCHMA
AccessioniPrimary (citable) accession number: Q26544
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 15, 2002
Last sequence update: November 1, 1996
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.