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Protein
Submitted name:

Rbp12 protein

Gene

Rox8

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • mRNA binding Source: FlyBase

GO - Biological processi

  • mRNA splicing, via spliceosome Source: FlyBase
  • regulation of alternative mRNA splicing, via spliceosome Source: FlyBase

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Enzyme and pathway databases

ReactomeiR-DME-6803529. FGFR2 alternative splicing.

Names & Taxonomyi

Protein namesi
Submitted name:
Rbp12 proteinImported
Gene namesi
Name:Rox8Imported
Synonyms:Rbp12Imported
ORF Names:CG5422Imported
OrganismiDrosophila melanogaster (Fruit fly)Imported
Taxonomic identifieri7227 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora

Organism-specific databases

FlyBaseiFBgn0005649. Rox8.

Subcellular locationi

GO - Cellular componenti

  • nucleus Source: FlyBase
  • U1 snRNP Source: FlyBase

PTM / Processingi

Proteomic databases

PaxDbiQ26281.

Expressioni

Gene expression databases

BgeeiFBgn0005649.

Interactioni

Protein-protein interaction databases

STRINGi7227.FBpp0083976.

Structurei

3D structure databases

ProteinModelPortaliQ26281.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 41RRM (RNA recognition motif)InterPro annotationAdd BLAST41

Phylogenomic databases

eggNOGiKOG0148. Eukaryota.
ENOG410XQ8U. LUCA.
OrthoDBiEOG091G0FH8.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.

Sequencei

Sequence statusi: Fragment.

Q26281-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40 
FVDNLDSSVS EDLLIALFST MGPVKSCKII REPGNDPYAF I
Length:41
Mass (Da):4,503
Last modified:November 1, 1996 - v1
Checksum:i28A140EE34DC5C4A
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei41Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S51743 mRNA. Translation: AAB24632.1.
PIRiB47752.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
S51743 mRNA. Translation: AAB24632.1.
PIRiB47752.

3D structure databases

ProteinModelPortaliQ26281.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7227.FBpp0083976.

Proteomic databases

PaxDbiQ26281.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

FlyBaseiFBgn0005649. Rox8.

Phylogenomic databases

eggNOGiKOG0148. Eukaryota.
ENOG410XQ8U. LUCA.
OrthoDBiEOG091G0FH8.

Enzyme and pathway databases

ReactomeiR-DME-6803529. FGFR2 alternative splicing.

Gene expression databases

BgeeiFBgn0005649.

Family and domain databases

InterProiView protein in InterPro
IPR000504. RRM_dom.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ26281_DROME
AccessioniPrimary (citable) accession number: Q26281
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: June 7, 2017
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.