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Protein

Alpha-amylase

Gene
N/A
Organism
Litopenaeus vannamei (Whiteleg shrimp) (Penaeus vannamei)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationSAAS annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
OrganismiLitopenaeus vannamei (Whiteleg shrimp) (Penaeus vannamei)Imported
Taxonomic identifieri6689 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaCrustaceaMalacostracaEumalacostracaEucaridaDecapodaDendrobranchiataPenaeoideaPenaeidaeLitopenaeus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 512495Alpha-amylaseSequence analysisPRO_5004203049Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ26193.
SMRiQ26193. Positions 18-512.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 414388AamyInterPro annotationAdd
BLAST
Domaini423 – 51189Aamy_CInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Q26193-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRVAPLVVL LAAAAQAQWD PNSSNGQVIV HLFEWKWSDI AAECENFLGP
60 70 80 90 100
RGFAGVQVSP PNEYVEVYQG DVKRPWWERY QPVSYKLVTR SGDENAFKDM
110 120 130 140 150
VTRCNNVGVR IYVDAVINHM SGGWPMGTGA SGGSSFDSGA ESYPGVPYSA
160 170 180 190 200
FDFNDGNCHT GSGNIENYGD ANQVRNCKLV GLNDLNQGTD YVRGKIREFM
210 220 230 240 250
NKLISYGVAG FRIDASKHMW PGDMKAIFDS LDNLNTDFFK AGARPFIFQE
260 270 280 290 300
VIDLGGEAIS SGEYVGNGRV TEFRYGKYLG EAFRGNNQLK YLNNFGEGWG
310 320 330 340 350
MIDRHDALVF IDNHDNQRGH GAGGDMILTF RVSKWYKMAT AYMLAWPYGY
360 370 380 390 400
TRVMSSYYWD QWWENGQDKN DWIGPPHDGS FNIISPSFNA DGSCGNGWIC
410 420 430 440 450
EHRWRQIYNM VEFRNVAHGT DMNDWWDNGS NQIAFCRGNK GFLAINNDGW
460 470 480 490 500
DLKETLQTCL PAGTYCDVIS GSKNGGSCTG KSVTVGGDGK AYIEITTMED
510
DGVLAIHANS KL
Length:512
Mass (Da):56,997
Last modified:November 1, 1996 - v1
Checksum:i693F6BF9C8FF3178
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X77318 mRNA. Translation: CAA54524.1.
PIRiS41881.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X77318 mRNA. Translation: CAA54524.1.
PIRiS41881.

3D structure databases

ProteinModelPortaliQ26193.
SMRiQ26193. Positions 18-512.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Van Wormhoudt A.E.
    Submitted (JAN-1994) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: HepatopancreasImported.
  2. "Cloning and sequencing analysis of three amylase cDNAs in the shrimp Penaeus vannamei (Crustacea decapoda): evolutionary aspects."
    Van Wormhoudt A., Sellos D.
    J. Mol. Evol. 42:543-551(1996) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: HepatopancreasImported.

Entry informationi

Entry nameiQ26193_LITVA
AccessioniPrimary (citable) accession number: Q26193
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1996
Last sequence update: November 1, 1996
Last modified: May 11, 2016
This is version 91 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.