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Q24ZY7 (Q24ZY7_DESHY) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DSY0616 EMBL BAE82405.1
OrganismDesulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]
Taxonomic identifier138119 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium

Protein attributes

Sequence length818 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
Q24ZY7 [UniParc].

Last modified April 18, 2006. Version 1.
Checksum: 60FF05F5F5165E1C

FASTA81893,498
        10         20         30         40         50         60 
MRSKLNQYNQ KRNFTRTLEP EGITEMPQEG LRFVVQHHLA RRDHYDLRLE WDGAMLSWAV 

        70         80         90        100        110        120 
PKGPSYNTWD KRLAVQVEDH PLEYRHFEGT IPKGEYGGGV VMLWDEGFWE PYVDVDGGLH 

       130        140        150        160        170        180 
EGMLKFVLKG RRLKGRWALV RMKGKAGDKK DNWLLLKEKD DYVQTADGIS QFTTSIRTGR 

       190        200        210        220        230        240 
TMTEIEEGEE EKFTRNPFSS TEVQLAKLVR HLPEGEGWLY ELKYDGYRIV AYLEGHRVRL 

       250        260        270        280        290        300 
MTRNGHDYTE RFQDVASSLA DWAEGRAMIL DGEMAITDPE GKTDFQALQN YLKNPRTKNL 

       310        320        330        340        350        360 
TYILFDLLAL DGADLRGHPL IHRKETLAAL LENAPPNLHY SRHVRGKGEE SFRAACEAGM 

       370        380        390        400        410        420 
EGIIGKKADA LYSGTRNGDW IKLKCDQRQE FIIVGYTLSQ KRISGISSLL LGIYEGRELV 

       430        440        450        460        470        480 
YAGRAGTGLK ESDMEELEEK FKDIRRSSAP FKPAPKPRAN ERITWVEPEL VVEVKFADWT 

       490        500        510        520        530        540 
EENLLRQASF KGLRADKNPR EIRRERADEE KDDGELQLQP PAPERKSLMK INTNSMIIEG 

       550        560        570        580        590        600 
IKISSPDKVI FTDPEITKVD MIRYYAKVAE RMLPYVSRRI LSIVRCPKGV AQTCFYKKHP 

       610        620        630        640        650        660 
GPGSQGVVTI PILTSDGTTE DYFYIENPSG LIAEAQMGTL EFHIWGSRVD ELEKPDLMVF 

       670        680        690        700        710        720 
DLDPDEGMEL GTVRQGVRDL KAILAELSLN SYLKTSGGKG YHVVVPLKPA VSWGVFHDFA 

       730        740        750        760        770        780 
QGVAQVMEQK WPDRYTSNVR KAKRTNRIFI DWIRNGRGAT SIAPYSLRAR RGAKVSMPIT 

       790        800        810 
WEELDTVAPD GVDMAEALRR IQDSDPWEGF FRNQQRLQ 

« Hide

References

[1]"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y51.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP008230 Genomic DNA. Translation: BAE82405.1.
RefSeqYP_516849.1. NC_007907.1.

3D structure databases

ProteinModelPortalQ24ZY7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING138119.DSY0616.

Protocols and materials databases

DNASU3953636.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAE82405; BAE82405; DSY0616.
GeneID3953636.
KEGGdsy:DSY0616.
PATRIC21669449. VBIDesHaf65307_0693.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMANGLPDFQ.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycDHAF138119:GHT5-641-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ24ZY7_DESHY
AccessionPrimary (citable) accession number: Q24ZY7
Entry history
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: May 14, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)