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Q24ZY7

- Q24ZY7_DESHY

UniProt

Q24ZY7 - Q24ZY7_DESHY

Protein
Submitted name:

Putative uncharacterized protein

Gene

DSY0616

Organism
Desulfitobacterium hafniense (strain Y51)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (18 Apr 2006)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Enzyme and pathway databases

    BioCyciDHAF138119:GHT5-641-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:DSY0616Imported
    OrganismiDesulfitobacterium hafniense (strain Y51)Imported
    Taxonomic identifieri138119 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium
    ProteomesiUP000001946: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi138119.DSY0616.

    Structurei

    3D structure databases

    ProteinModelPortaliQ24ZY7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG3285.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiNGLPDFQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q24ZY7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRSKLNQYNQ KRNFTRTLEP EGITEMPQEG LRFVVQHHLA RRDHYDLRLE    50
    WDGAMLSWAV PKGPSYNTWD KRLAVQVEDH PLEYRHFEGT IPKGEYGGGV 100
    VMLWDEGFWE PYVDVDGGLH EGMLKFVLKG RRLKGRWALV RMKGKAGDKK 150
    DNWLLLKEKD DYVQTADGIS QFTTSIRTGR TMTEIEEGEE EKFTRNPFSS 200
    TEVQLAKLVR HLPEGEGWLY ELKYDGYRIV AYLEGHRVRL MTRNGHDYTE 250
    RFQDVASSLA DWAEGRAMIL DGEMAITDPE GKTDFQALQN YLKNPRTKNL 300
    TYILFDLLAL DGADLRGHPL IHRKETLAAL LENAPPNLHY SRHVRGKGEE 350
    SFRAACEAGM EGIIGKKADA LYSGTRNGDW IKLKCDQRQE FIIVGYTLSQ 400
    KRISGISSLL LGIYEGRELV YAGRAGTGLK ESDMEELEEK FKDIRRSSAP 450
    FKPAPKPRAN ERITWVEPEL VVEVKFADWT EENLLRQASF KGLRADKNPR 500
    EIRRERADEE KDDGELQLQP PAPERKSLMK INTNSMIIEG IKISSPDKVI 550
    FTDPEITKVD MIRYYAKVAE RMLPYVSRRI LSIVRCPKGV AQTCFYKKHP 600
    GPGSQGVVTI PILTSDGTTE DYFYIENPSG LIAEAQMGTL EFHIWGSRVD 650
    ELEKPDLMVF DLDPDEGMEL GTVRQGVRDL KAILAELSLN SYLKTSGGKG 700
    YHVVVPLKPA VSWGVFHDFA QGVAQVMEQK WPDRYTSNVR KAKRTNRIFI 750
    DWIRNGRGAT SIAPYSLRAR RGAKVSMPIT WEELDTVAPD GVDMAEALRR 800
    IQDSDPWEGF FRNQQRLQ 818
    Length:818
    Mass (Da):93,498
    Last modified:April 18, 2006 - v1
    Checksum:i60FF05F5F5165E1C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008230 Genomic DNA. Translation: BAE82405.1.
    RefSeqiWP_005809852.1. NC_007907.1.
    YP_516849.1. NC_007907.1.

    Genome annotation databases

    EnsemblBacteriaiBAE82405; BAE82405; DSY0616.
    GeneIDi3953636.
    KEGGidsy:DSY0616.
    PATRICi21669449. VBIDesHaf65307_0693.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP008230 Genomic DNA. Translation: BAE82405.1 .
    RefSeqi WP_005809852.1. NC_007907.1.
    YP_516849.1. NC_007907.1.

    3D structure databases

    ProteinModelPortali Q24ZY7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 138119.DSY0616.

    Protocols and materials databases

    DNASUi 3953636.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAE82405 ; BAE82405 ; DSY0616 .
    GeneIDi 3953636.
    KEGGi dsy:DSY0616.
    PATRICi 21669449. VBIDesHaf65307_0693.

    Phylogenomic databases

    eggNOGi COG3285.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi NGLPDFQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci DHAF138119:GHT5-641-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
      Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
      J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y51Imported.

    Entry informationi

    Entry nameiQ24ZY7_DESHY
    AccessioniPrimary (citable) accession number: Q24ZY7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: April 18, 2006
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3