Q24ZY7 (Q24ZY7_DESHY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE82405.1

Gene names

Ordered Locus Names:

DSY0616

Organism

Desulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]

Taxonomic identifier

138119 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfitobacterium › Desulfitobacterium hafniense

Protein attributes

Sequence length	818 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro DNA primase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q24ZY7 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: 60FF05F5F5165E1C	FASTA	818	93,498
	10 20 30 40 50 60 MRSKLNQYNQ KRNFTRTLEP EGITEMPQEG LRFVVQHHLA RRDHYDLRLE WDGAMLSWAV 70 80 90 100 110 120 PKGPSYNTWD KRLAVQVEDH PLEYRHFEGT IPKGEYGGGV VMLWDEGFWE PYVDVDGGLH 130 140 150 160 170 180 EGMLKFVLKG RRLKGRWALV RMKGKAGDKK DNWLLLKEKD DYVQTADGIS QFTTSIRTGR 190 200 210 220 230 240 TMTEIEEGEE EKFTRNPFSS TEVQLAKLVR HLPEGEGWLY ELKYDGYRIV AYLEGHRVRL 250 260 270 280 290 300 MTRNGHDYTE RFQDVASSLA DWAEGRAMIL DGEMAITDPE GKTDFQALQN YLKNPRTKNL 310 320 330 340 350 360 TYILFDLLAL DGADLRGHPL IHRKETLAAL LENAPPNLHY SRHVRGKGEE SFRAACEAGM 370 380 390 400 410 420 EGIIGKKADA LYSGTRNGDW IKLKCDQRQE FIIVGYTLSQ KRISGISSLL LGIYEGRELV 430 440 450 460 470 480 YAGRAGTGLK ESDMEELEEK FKDIRRSSAP FKPAPKPRAN ERITWVEPEL VVEVKFADWT 490 500 510 520 530 540 EENLLRQASF KGLRADKNPR EIRRERADEE KDDGELQLQP PAPERKSLMK INTNSMIIEG 550 560 570 580 590 600 IKISSPDKVI FTDPEITKVD MIRYYAKVAE RMLPYVSRRI LSIVRCPKGV AQTCFYKKHP 610 620 630 640 650 660 GPGSQGVVTI PILTSDGTTE DYFYIENPSG LIAEAQMGTL EFHIWGSRVD ELEKPDLMVF 670 680 690 700 710 720 DLDPDEGMEL GTVRQGVRDL KAILAELSLN SYLKTSGGKG YHVVVPLKPA VSWGVFHDFA 730 740 750 760 770 780 QGVAQVMEQK WPDRYTSNVR KAKRTNRIFI DWIRNGRGAT SIAPYSLRAR RGAKVSMPIT 790 800 810 WEELDTVAPD GVDMAEALRR IQDSDPWEGF FRNQQRLQ

References

[1]

"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195." Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H. J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y51.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008230 Genomic DNA. Translation: BAE82405.1.
RefSeq	YP_516849.1. NC_007907.1.
3D structure databases
ProteinModelPortal	Q24ZY7.
ModBase	Search...
Protein-protein interaction databases
STRING	138119.DSY0616.
Protocols and materials databases
DNASU	3953636.
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE82405; BAE82405; DSY0616.
GeneID	3953636.
KEGG	dsy:DSY0616.
PATRIC	21669449. VBIDesHaf65307_0693.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3285.
HOGENOM	HOG000222509.
KO	K01971.
OMA	VSMPITW.
ProtClustDB	CLSK950542.
Enzyme and pathway databases
BioCyc	DHAF138119:GHT5-641-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR014146. DNA_pol_LigD_ligase_dom. IPR002755. DNA_primase_S. IPR014144. LigD_PE_domain. IPR014145. LigD_pol. IPR012340. NA-bd_OB-fold. IPR014143. NHEJ_ligase_prk. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF01896. DNA_primase_S. 1 hit. PF13298. LigD_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR02777. LigD_PE_dom. 1 hit. TIGR02778. ligD_pol. 1 hit. TIGR02779. NHEJ_ligase_lig. 1 hit. TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q24ZY7_DESHY

Accession

Primary (citable) accession number: Q24ZY7

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 29, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)