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Q24ZY7

- Q24ZY7_DESHY

UniProt

Q24ZY7 - Q24ZY7_DESHY

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Protein
Submitted name: Putative uncharacterized protein
Gene
DSY0616
Organism
Desulfitobacterium hafniense (strain Y51)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciDHAF138119:GHT5-641-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
Ordered Locus Names:DSY0616Imported
OrganismiDesulfitobacterium hafniense (strain Y51)
Taxonomic identifieri138119 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaeDesulfitobacterium
ProteomesiUP000001946: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi138119.DSY0616.

Structurei

3D structure databases

ProteinModelPortaliQ24ZY7.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiNGLPDFQ.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q24ZY7-1 [UniParc]FASTAAdd to Basket

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MRSKLNQYNQ KRNFTRTLEP EGITEMPQEG LRFVVQHHLA RRDHYDLRLE    50
WDGAMLSWAV PKGPSYNTWD KRLAVQVEDH PLEYRHFEGT IPKGEYGGGV 100
VMLWDEGFWE PYVDVDGGLH EGMLKFVLKG RRLKGRWALV RMKGKAGDKK 150
DNWLLLKEKD DYVQTADGIS QFTTSIRTGR TMTEIEEGEE EKFTRNPFSS 200
TEVQLAKLVR HLPEGEGWLY ELKYDGYRIV AYLEGHRVRL MTRNGHDYTE 250
RFQDVASSLA DWAEGRAMIL DGEMAITDPE GKTDFQALQN YLKNPRTKNL 300
TYILFDLLAL DGADLRGHPL IHRKETLAAL LENAPPNLHY SRHVRGKGEE 350
SFRAACEAGM EGIIGKKADA LYSGTRNGDW IKLKCDQRQE FIIVGYTLSQ 400
KRISGISSLL LGIYEGRELV YAGRAGTGLK ESDMEELEEK FKDIRRSSAP 450
FKPAPKPRAN ERITWVEPEL VVEVKFADWT EENLLRQASF KGLRADKNPR 500
EIRRERADEE KDDGELQLQP PAPERKSLMK INTNSMIIEG IKISSPDKVI 550
FTDPEITKVD MIRYYAKVAE RMLPYVSRRI LSIVRCPKGV AQTCFYKKHP 600
GPGSQGVVTI PILTSDGTTE DYFYIENPSG LIAEAQMGTL EFHIWGSRVD 650
ELEKPDLMVF DLDPDEGMEL GTVRQGVRDL KAILAELSLN SYLKTSGGKG 700
YHVVVPLKPA VSWGVFHDFA QGVAQVMEQK WPDRYTSNVR KAKRTNRIFI 750
DWIRNGRGAT SIAPYSLRAR RGAKVSMPIT WEELDTVAPD GVDMAEALRR 800
IQDSDPWEGF FRNQQRLQ 818
Length:818
Mass (Da):93,498
Last modified:April 18, 2006 - v1
Checksum:i60FF05F5F5165E1C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008230 Genomic DNA. Translation: BAE82405.1.
RefSeqiWP_005809852.1. NC_007907.1.
YP_516849.1. NC_007907.1.

Genome annotation databases

EnsemblBacteriaiBAE82405; BAE82405; DSY0616.
GeneIDi3953636.
KEGGidsy:DSY0616.
PATRICi21669449. VBIDesHaf65307_0693.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008230 Genomic DNA. Translation: BAE82405.1 .
RefSeqi WP_005809852.1. NC_007907.1.
YP_516849.1. NC_007907.1.

3D structure databases

ProteinModelPortali Q24ZY7.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 138119.DSY0616.

Protocols and materials databases

DNASUi 3953636.
Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAE82405 ; BAE82405 ; DSY0616 .
GeneIDi 3953636.
KEGGi dsy:DSY0616.
PATRICi 21669449. VBIDesHaf65307_0693.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi NGLPDFQ.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci DHAF138119:GHT5-641-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195."
    Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H.
    J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y51.

Entry informationi

Entry nameiQ24ZY7_DESHY
AccessioniPrimary (citable) accession number: Q24ZY7
Entry historyi
Integrated into UniProtKB/TrEMBL: April 18, 2006
Last sequence update: April 18, 2006
Last modified: September 3, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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