Q24ZK5 (Q24ZK5_DESHY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL BAE82537.1

Gene names

Ordered Locus Names:

DSY0748

Organism

Desulfitobacterium hafniense (strain Y51) [Complete proteome] [HAMAP]

Taxonomic identifier

138119 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfitobacterium › Desulfitobacterium hafniense

Protein attributes

Sequence length	182 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding SAAS SAAS007627
Molecular function	Sigma factor SAAS SAAS007627
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, initiation Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro sigma factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q24ZK5 [UniParc]. Last modified April 18, 2006. Version 1. Checksum: F4CA54CB788F3979	FASTA	182	21,394
	10 20 30 40 50 60 MEDAELIQQV LKGRHEQYGL LVQRYQEPLI HFLRGILGAE DEVFDCAQEA FLAAYGNLWR 70 80 90 100 110 120 YSDKYTFRAW LYAIARNKAI DLMRKRKREI PLSIDESLVD RQMGPEEAYL AKEQALDVRT 130 140 150 160 170 180 ILEELPEHYR QALYLRYQQE LSYEEISTVL NIPISSVKTH LHRGKEKLRQ IMEGRNGHEG NG

References

[1]

"Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195." Nonaka H., Keresztes G., Shinoda Y., Ikenaga Y., Abe M., Naito K., Inatomi K., Furukawa K., Inui M., Yukawa H. J. Bacteriol. 188:2262-2274(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y51.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP008230 Genomic DNA. Translation: BAE82537.1.
RefSeq	YP_516981.1. NC_007907.1.
3D structure databases
ProteinModelPortal	Q24ZK5.
ModBase	Search...
Protein-protein interaction databases
STRING	138119.DSY0748.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAE82537; BAE82537; DSY0748.
GeneID	3953954.
KEGG	dsy:DSY0748.
PATRIC	21669751. VBIDesHaf65307_0845.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1595.
HOGENOM	HOG000094755.
KO	K03088.
OMA	EGRNGHE.
ProtClustDB	CLSK2465605.
Enzyme and pathway databases
BioCyc	DHAF138119:GHT5-749-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR014284. RNA_pol_sigma-70_dom. IPR007627. RNA_pol_sigma70_r2. IPR013249. RNA_pol_sigma70_r4_t2. IPR013325. RNA_pol_sigma_r2. IPR013324. RNA_pol_sigma_r3_r4. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF04542. Sigma70_r2. 1 hit. PF08281. Sigma70_r4_2. 1 hit. [Graphical view]
SUPFAM	SSF88946. Sigma_r2. 1 hit. SSF88659. Sigma_r3_r4. 1 hit.
TIGRFAMs	TIGR02937. sigma70-ECF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q24ZK5_DESHY

Accession

Primary (citable) accession number: Q24ZK5

Entry history

Integrated into UniProtKB/TrEMBL:	April 18, 2006
Last sequence update:	April 18, 2006
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)